RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR4X2Q8NGF9 303 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR10Z1Q8NGY1 313 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR6K3Q8NGY3 331 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR4X1Q8NH49 305 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR4A5Q8NH83 315 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 UBA3Q8TBC4 463 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TWIST2Q8WVJ9 160 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TMEM234Q8WY98 164 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 MCUR1Q96AQ8 359 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PYURFQ96I23 114 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 YPEL4Q96NS1 127 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR2M4Q96R27 311 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PLIN2Q99541 437 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 GPR22Q99680 433 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TMED9Q9BVK6 235 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 ARL6Q9H0F7 186 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR2D2Q9H210 308 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 OR51B5Q9H339 312 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TDRD3Q9H7E2 651 aaKnown RBP0.16□□□□□ -2.38
PDGFC-208ENST00000512711 C6orf50Q9HD87 102 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PRSS16Q9NQE7 514 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 KCNIP2Q9NS61 270 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 DOK5Q9P104 306 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 TBC1D24Q9ULP9 559 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 MINOS1-NBL1R4GNA1 71 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 PLEKHG2Q9H7P9 1386 aa0.16□□□□□ -2.38
PDGFC-208ENST00000512711 INTS1Q8N201 2190 aaKnown RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 COL18A1P39060 1754 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 KCNE1BA0A087WTH5 132 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 LOC102725191A0A1B0GVB3 256 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 A0A1W2PRD5 423 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 IGSF23A1L1A6 192 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF99A8MXY4 864 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 UPK1AO00322 258 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 LECT2O14960 151 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SIVA1O15304 175 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SLC25A20O43772 301 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SLC37A4O43826 429 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CACNG3O60359 315 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 HSBP1O75506 76 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 RLN2P04090 185 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF7P17097 686 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ALOX5APP20292 161 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 TAC1P20366 129 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 GSTM3P21266 225 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 IL12BP29460 328 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 PEBP1P30086 187 aaKnown RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 YWHAEP62258 255 aaKnown RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 TSPAN31Q12999 210 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 DNAJC3Q13217 504 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 APOFQ13790 326 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C5orf64Q2M2E5 130 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CEACAM21Q3KPI0 293 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF404Q494X3 552 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CDNFQ49AH0 187 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ATP6AP1LQ52LC2 224 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SPANXN2Q5MJ10 180 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C10orf91Q5T1B1 145 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 NXNL2Q5VZ03 156 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 TMEM53Q6P2H8 277 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ERICH5Q6P6B1 374 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C16orf87Q6PH81 154 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CCDC121Q6ZUS5 278 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SSX9Q7RTT3 188 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 COA5Q86WW8 74 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 DAW1Q8N136 415 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 FAM58AQ8N1B3 248 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 BBS5Q8N3I7 341 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C10orf126Q8N4M7 172 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 GPATCH11Q8N954 259 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 INO80EQ8NBZ0 244 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 OR6K6Q8NGW6 343 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ZNRF2Q8NHG8 242 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 NDNFQ8TB73 568 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CPB2Q96IY4 423 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CAPZA3Q96KX2 299 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C9orf72Q96LT7 481 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 JSRP1Q96MG2 331 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 GLT1D1Q96MS3 346 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 QKIQ96PU8 341 aaKnown RBP eCLIP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 CHP1Q99653 195 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 BCL2L14Q9BZR8 327 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ELOVL6Q9H5J4 265 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 GEMIN7Q9H840 131 aaKnown RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SDHAF3Q9NRP4 125 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 C14orf166Q9Y224 244 aaKnown RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 BTRCQ9Y297 605 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 KLF12Q9Y4X4 402 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 PHLDA3Q9Y5J5 127 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 SOX21Q9Y651 276 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 ZFHX2Q9C0A1 2572 aaPredicted RBP0.15□□□□□ -2.39
PDGFC-208ENST00000512711 POLEQ07864 2286 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 PCLOQ9Y6V0 5065 aa0.15□□□□□ -2.39
PDGFC-208ENST00000512711 RTEL1-TNFRSF6BF6WH68 1400 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 CUL9Q8IWT3 2517 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 ANKRD17O75179 2603 aaKnown RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 TECTAO75443 2155 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IGLV3-9A0A075B6K5 115 aa0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV2-40A0A087WW87 121 aaPredicted RBP0.14□□□□□ -2.39
PDGFC-208ENST00000512711 IGHV2OR16-5A0A0B4J2B6 119 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms