RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TNFSF12O43508 249 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MUC1P15941 1255 aaPredicted RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 PMELP40967 661 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 TGIF2LYQ8IUE0 185 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 TGIF2LXQ8IUE1 241 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PDZD9Q8IXQ8 264 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MAFIPQ8WZ33 124 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MRPL22Q9NWU5 206 aaKnown RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 IGHV1-18A0A0C4DH31 117 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 OR4C45A6NMZ5 311 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 RPA2P15927 270 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 KITLGP21583 273 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 EFNA4P52798 201 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PLA2G7Q13093 441 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 ENDOGQ14249 297 aaKnown RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 TMEM30BQ3MIR4 351 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 NUP37Q8NFH4 326 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 OR8H1Q8NGG4 311 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 VSTM2AQ8TAG5 236 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 YIPF6Q96EC8 236 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 OR2D2Q9H210 308 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 CRIM1Q9NZV1 1036 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PIPOXQ9P0Z9 390 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 INSIG2Q9Y5U4 225 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 LOC390937A0A1W2PQ73 354 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 TMEM200CA6NKL6 621 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 AADACP22760 399 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 FGF9P31371 208 aaPredicted RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 LGALS7P47929 136 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 B3GALT5-AS1P59052 145 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 Q3ZCU0 254 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 SIAH3Q8IW03 269 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 OR56B4Q8NH76 319 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 F5H0A9 414 aaPredicted RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 CST4P01036 141 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 RNFT1Q5M7Z0 435 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 ZNF787Q6DD87 383 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 C6orf201Q7Z4U5 140 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 SULT4A1Q9BR01 284 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 POFUT1Q9H488 388 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 THYN1Q9P016 225 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 RNF24Q9Y225 148 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PIKFYVEQ9Y2I7 2098 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 HMX3A6NHT5 357 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 LEUTXA8MZ59 168 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 GEMIN2O14893 280 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 SEMA7AO75326 666 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 IFNA7P01567 189 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ISG15P05161 165 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 AGAP20933 346 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 HRH1P35367 487 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ZNF816Q0VGE8 651 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 SHEQ5VZ18 495 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 IGFL2Q6UWQ7 119 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 RFPL4BQ6ZWI9 263 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM122BQ7Z309 247 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ZNF554Q86TJ5 538 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 KDF1Q8NAX2 398 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 TMEM229BQ8NBD8 167 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR5P3Q8WZ94 311 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 VOPP1Q96AW1 172 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 MARS2Q96GW9 593 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 CIB3Q96Q77 187 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 NAA50Q9GZZ1 169 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM206AQ9NX38 181 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 A6NNC1 897 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 TGFAP01135 160 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 CRYGSP22914 178 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 THBS3P49746 956 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 RBM11P57052 281 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 BTG1P62324 171 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM3AP98173 230 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 DDOQ99489 341 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 CABIN1Q9Y6J0 2220 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 A0A0B4J203 849 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A10PA6NDY2 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A18PA6NE21 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A16PA6NEW6 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A20PA6NIJ5 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A8PA6NJQ4 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A7PA6NKC0 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A22PA8MWA6 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A12PA8MX19 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A5PA8MXJ8 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A23PA8MXZ1 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A15PP0C7V4 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A13PP0C7W8 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A14PP0C7W9 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FAM90A24PP0C7X0 464 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 SLC25A16P16260 332 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 KIR3DL2P43630 455 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 FGF12P61328 243 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 RPS27AP62979 156 aaKnown RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 BAXQ07812 192 aa4.41□□□□□ -1.7
PHF3-210ENST00000509876 ZNF672Q499Z4 452 aaPredicted RBP4.41□□□□□ -1.7
PHF3-210ENST00000509876 CCBE1Q6UXH8 406 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms