RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 NIPSNAP1Q9BPW8 284 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 POMPQ9Y244 141 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C5orf49A4QMS7 147 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ASPDHA6ND91 283 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 GSTZ1O43708 216 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR7C1O76099 320 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 HLCSP50747 726 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 PSPHP78330 225 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 IFITM3Q01628 133 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SEMG2Q02383 582 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ZP4Q12836 540 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 CDKN3Q16667 212 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C5orf64Q2M2E5 130 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 LINC00471Q8N535 108 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ST6GALNAC3Q8NDV1 305 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR2Z1Q8NG97 314 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR10G3Q8NGC4 313 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 POP5Q969H6 163 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SEH1LQ96EE3 360 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ALKBH3Q96Q83 286 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 CHIAQ9BZP6 476 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 FLRT3Q9NZU0 649 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 NOTCH4Q99466 2003 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1B0GTL3 188 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM213A2RRL7 107 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FAM231BA6NCW3 169 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 OR4C45A6NMZ5 311 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HEPACAM2A8MVW5 462 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CRYGBP07316 175 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HTR1DP28221 377 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CCKBRP32239 447 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 PDLIM4P50479 330 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CRYBA4P53673 196 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 EDDM3AQ14507 147 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FCN2Q15485 313 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TBC1D28Q2M2D7 210 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 B3GNTL1Q67FW5 361 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 C22orf39Q6P5X5 142 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM151AQ8N4L1 468 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ARL14EPQ8N8R7 260 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ABHD3Q8WU67 409 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ARSGQ96EG1 525 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TSSK3Q96PN8 268 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 C20orf27Q9GZN8 174 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 OR51I2Q9H344 312 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 REEP1Q9H902 201 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NDUFB8O95169 186 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NDUFA7O95182 113 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 GUSBP08236 651 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CEACAM6P40199 344 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 GLIPR1P48060 266 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FABP6P51161 128 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TNFRSF9Q07011 255 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SMIM21Q3B7S5 101 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ABCA11PQ4W5N1 156 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CENPWQ5EE01 88 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 LY6G5CQ5SRR4 150 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HOGA1Q86XE5 327 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 Q8N1Y9 231 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF675Q8TD23 568 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 KCNA7Q96RP8 456 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SLC29A3Q9BZD2 475 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ALX4Q9H161 411 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TNFRSF18Q9Y5U5 241 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1B0GV90 55 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FAAHO00519 579 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CCL16O15467 120 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 OR7C2O60412 319 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NDUFS7O75251 213 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 OR2J2O76002 312 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 VENTXO95231 258 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 APOMO95445 188 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CSF3P09919 207 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HKR1P10072 659 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HIST3H3Q16695 136 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CD163Q86VB7 1156 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 MS4A15Q8N5U1 240 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ELSPBP1Q96BH3 223 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SLC35E1Q96K37 410 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 KCTD14Q9BQ13 255 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NT5DC2Q9H857 520 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SIGLEC8Q9NYZ4 499 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TAAR2Q9P1P5 351 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 YBX2Q9Y2T7 364 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 IGLV3-16A0A075B6K0 115 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 A0A0D9SEW6 157 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NME4O00746 187 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CD160O95971 181 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FABP2P12104 132 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HOXB6P17509 224 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 KIR2DS4P43632 304 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 KCNJ3P48549 501 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 P2RX1P51575 399 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms