RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR4P4Q8NGL7 312 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 PELI1Q96FA3 418 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 SPACA5Q96QH8 159 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 CLEC7AQ9BXN2 247 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 HMG20AQ9NP66 347 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 HHLA2Q9UM44 414 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 HILPDAQ9Y5L2 63 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 MINOS1-NBL1R4GNA1 71 aa10.46□□□□□ -0.73
HMGCS1-205ENST00000508319 ADARB2-AS1A8MUL3 147 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 F2RL2O00254 374 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 KDM4BO94953 1096 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 OR2H2O95918 312 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 CYB5AP00167 134 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 MT-ND2P03891 347 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 HTR1AP08908 422 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 CD28P10747 220 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 GABRB1P18505 474 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 ALDH3A2P51648 485 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 KPRPQ5T749 579 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 PRAMEF5Q5TYX0 476 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 BAIAP2L2Q6UXY1 529 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 Q6ZS46 218 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 ACBD7Q8N6N7 88 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 OR5D18Q8NGL1 313 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 OR13C9Q8NGT0 318 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 NDNFQ8TB73 568 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 LGALS12Q96DT0 336 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 WNT10AQ9GZT5 417 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 COMMD4Q9H0A8 199 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 EXOSC4Q9NPD3 245 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 AASSQ9UDR5 926 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 GSTK1Q9Y2Q3 226 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 UBE2J1Q9Y385 318 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 ORC6Q9Y5N6 252 aa10.45□□□□□ -0.74
HMGCS1-205ENST00000508319 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 J3QLW9 94 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF19P17023 458 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 BLCAPP62952 87 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 SLC34A1Q06495 639 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 ALKBH1Q13686 389 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 TMEM95Q3KNT9 176 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 ZIK1Q3SY52 487 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 ZBTB49Q6ZSB9 765 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 TRAPPC6BQ86SZ2 158 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 CBR4Q8N4T8 237 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 OR13C3Q8NGS6 347 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 C4orf36Q96KX1 117 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 PRSS22Q9GZN4 317 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 GLS2Q9UI32 602 aa10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 EXOGQ9Y2C4 368 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-205ENST00000508319 FAM172BPA6NC97 362 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 SH2D1BO14796 132 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 IGLV1-47P01700 117 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 OCM2P0CE71 109 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 OCMP0CE72 109 aaPredicted RBP10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 CDK2P24941 298 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 LMO1P25800 156 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 HTR1DP28221 377 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 CD34P28906 385 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 GDNFP39905 211 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 GLIPR1P48060 266 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 ZP1P60852 638 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 BDH1Q02338 343 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 AESQ08117 197 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 KPNB1Q14974 876 aaKnown RBP10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 FBLN7Q53RD9 439 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 Q6P435 159 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 HEPN1Q6WQI6 88 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 CORO2AQ92828 525 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 OR5M11Q96RB7 305 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 ZNF649Q9BS31 505 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 ALG8Q9BVK2 526 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 MMP28Q9H239 520 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 GAL3ST2Q9H3Q3 398 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 MYRFQ9Y2G1 1151 aa10.43□□□□□ -0.74
HMGCS1-205ENST00000508319 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 ODAMA1E959 279 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 SNTNA6NMZ2 147 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 SULT1B1O43704 296 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 ZFPL1O95159 310 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 CSN2P05814 226 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 DBTP11182 482 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 VDAC2P45880 294 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 IL18R1Q13478 541 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 GALEQ14376 348 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 CDK5R1Q15078 307 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 RTN4RL2Q86UN3 420 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 LHFPL3Q86UP9 236 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 NDUFA11Q86Y39 141 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 SAXO1Q8IYX7 474 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 ABHD12Q8N2K0 398 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 COQ2Q96H96 371 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 CITED2Q99967 270 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 ZCCHC4Q9H5U6 513 aa10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 ISG20L2Q9H9L3 353 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-205ENST00000508319 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms