RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 OR11G2Q8NGC1 345 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 SCAMP5Q8TAC9 235 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM174Q8WUU8 243 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 RXFP2Q8WXD0 754 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 HOXB13Q92826 284 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-203ENST00000502998 IMP4Q96G21 291 aaKnown RBP5.7□□□□□ -1.5
CLCN3-203ENST00000502998 COQ2Q96H96 371 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 GRAMD2BQ96HH9 432 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF75AQ96N20 296 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 MS4A10Q96PG2 267 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 PAAF1Q9BRP4 392 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 NDFIP1Q9BT67 221 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 LMF2Q9BU23 707 aaKnown RBP5.7□□□□□ -1.5
CLCN3-203ENST00000502998 VN1R1Q9GZP7 353 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 SLC35B3Q9H1N7 401 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 TUBB1Q9H4B7 451 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 HINT3Q9NQE9 182 aaKnown RBP5.7□□□□□ -1.5
CLCN3-203ENST00000502998 CLN6Q9NWW5 311 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 KLRF1Q9NZS2 232 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 RNF115Q9Y4L5 304 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 HS3ST3B1Q9Y662 390 aa5.7□□□□□ -1.5
CLCN3-203ENST00000502998 CHD3Q12873 2000 aaKnown RBP5.7□□□□□ -1.5
CLCN3-203ENST00000502998 FANCMQ8IYD8 2048 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 TRAV14DV4A0A0A6YYC5 116 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 KIR2DS1A0A191URI9 304 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 GXYLT2A0PJZ3 443 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 CASTOR2A6NHX0 329 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ANKRD30BLA7E2S9 258 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 B5MCH6 92 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 PTGESO14684 152 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 MSTNO14793 375 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 YPEL1O60688 119 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 GRAP2O75791 330 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 IL2RAP01589 272 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 DBIP07108 87 aaKnown RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 HIST1H1CP16403 213 aaKnown RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ALOX5APP20292 161 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 KIR2DL1P43626 348 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 PRLHRP49683 370 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 SULT1A2P50226 295 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 FOXG1P55316 489 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 TMPRSS3P57727 454 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 MEF2BQ02080 365 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 MFAP5Q13361 173 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 TUSC3Q13454 348 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ELAVL3Q14576 367 aaKnown RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 KIR2DS1Q14954 304 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ZIC1Q15915 447 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 DCST2Q5T1A1 773 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 FAM162BQ5T6X4 162 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 EEF1DP3Q658K8 133 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 UFSP1Q6NVU6 142 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 NIPAL3Q6P499 406 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ENPP7Q6UWV6 458 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 Q6ZN92 141 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 FOXI2Q6ZQN5 318 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 C19orf35Q6ZS72 473 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 COMMD6Q7Z4G1 85 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 CLEC14AQ86T13 490 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM25Q86YD3 366 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 GPR135Q8IZ08 494 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 RNF175Q8N4F7 328 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 NUP43Q8NFH3 380 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 OR10G9Q8NGN4 311 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 OR52P1PQ8NH57 321 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 KIR2DL5BQ8NHK3 375 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 SECTM1Q8WVN6 248 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 LHX4Q969G2 390 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 RNF183Q96D59 192 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 MMABQ96EY8 250 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 WDR89Q96FK6 387 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 YPEL2Q96QA6 119 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 HIST1H2AAQ96QV6 131 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 GABRG3Q99928 467 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 TBL1YQ9BQ87 522 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 SLC25A21Q9BQT8 299 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 POLR2J2Q9GZM3 115 aaKnown RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 NMRAL1Q9HBL8 299 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF226Q9NYT6 803 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 PRSS50Q9UI38 385 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 RALYQ9UKM9 306 aaKnown RBP5.69□□□□□ -1.5
CLCN3-203ENST00000502998 SLC7A7Q9UM01 511 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 HS3ST2Q9Y278 367 aa5.69□□□□□ -1.5
CLCN3-203ENST00000502998 MYO18AQ92614 2054 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 A0A1B0GUS0 222 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 A0A1W2PRE2 83 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 MAP1LC3B2A6NCE7 125 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ANTXRLA6NF34 631 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE10A6NGK3 116 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 B4DGG1 531 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 HHLA1C9JL84 531 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 AGRPO00253 132 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 GEMIN2O14893 280 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TAX1BP3O14907 124 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 KLK10O43240 276 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CD5LO43866 347 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 NDUFB6O95139 128 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms