RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 DLL4Q9NR61 685 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 GPR132Q9UNW8 380 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 A0A1B0GWJ7 208 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 SMLR1H3BR10 107 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 SDCBPO00560 298 aaPredicted RBP18.71■□□□□ 0.59
PTPN13-205ENST00000502971 FPR2P25090 351 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 GLRXP35754 106 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 ECI1P42126 302 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 ERVK11-1P61568 191 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 IGFBP7Q16270 282 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 SRSF7Q16629 238 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTPN13-205ENST00000502971 ALKBH2Q6NS38 261 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 OR2AK2Q8NG84 335 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 RND1Q92730 232 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 FN3KRPQ9HA64 309 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 NECAP2Q9NVZ3 263 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 IL36RNQ9UBH0 155 aa18.71■□□□□ 0.59
PTPN13-205ENST00000502971 MCRIP1C9JLW8 97 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 PGA5P0DJD9 388 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 UBE2MP61081 183 aaKnown RBP18.7■□□□□ 0.58
PTPN13-205ENST00000502971 MZT1Q08AG7 82 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 DHRS2Q13268 280 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 SURF2Q15527 256 aaPredicted RBP18.7■□□□□ 0.58
PTPN13-205ENST00000502971 AADACL3Q5VUY0 350 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 C17orf107Q6ZR85 190 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 NLRC3Q7RTR2 1065 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 LYG2Q86SG7 212 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 PEG10Q86TG7 708 aaKnown RBP18.7■□□□□ 0.58
PTPN13-205ENST00000502971 C12orf45Q8N5I9 185 aaPredicted RBP18.7■□□□□ 0.58
PTPN13-205ENST00000502971 DMRTA2Q96SC8 542 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 FZR1Q9UM11 496 aa18.7■□□□□ 0.58
PTPN13-205ENST00000502971 GIPP09681 153 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 ZNF250P15622 560 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 ZBTB25P24278 435 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 CCKARP32238 428 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 NPY4RP50391 375 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 CASP6P55212 293 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 NKX6-1P78426 367 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 Q6ZS49 121 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 NCCRP1Q6ZVX7 275 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 GTF3AQ92664 365 aaKnown RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 NRIP2Q9BQI9 281 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 CA10Q9NS85 328 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 CDIPTO14735 213 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 OR2A4O95047 310 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 HLA-AP01891 365 aaKnown RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 GRPP07492 148 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 MPPED2Q15777 294 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 Q6ZR03 302 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 TMEM185AQ8NFB2 350 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 OR2A7Q96R45 310 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 TLNRD1Q9H1K6 362 aa18.69■□□□□ 0.58
PTPN13-205ENST00000502971 RIMS4Q9H426 269 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-205ENST00000502971 ZGRF1Q86YA3 2104 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 FAM221AA4D161 298 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 NOS1APO75052 506 aaPredicted RBP18.68■□□□□ 0.58
PTPN13-205ENST00000502971 RPS23P62266 143 aaKnown RBP18.68■□□□□ 0.58
PTPN13-205ENST00000502971 RBM39Q14498 530 aaKnown RBP18.68■□□□□ 0.58
PTPN13-205ENST00000502971 SUMF2Q8NBJ7 301 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 ADAD2Q8NCV1 583 aaKnown RBP18.68■□□□□ 0.58
PTPN13-205ENST00000502971 ZFAND1Q8TCF1 268 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 ASB13Q8WXK3 278 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 CHMP1AQ9HD42 196 aaPredicted RBP18.68■□□□□ 0.58
PTPN13-205ENST00000502971 CACNA1BQ00975 2339 aa18.68■□□□□ 0.58
PTPN13-205ENST00000502971 KMT2BQ9UMN6 2715 aaPredicted RBP18.67■□□□□ 0.58
PTPN13-205ENST00000502971 C9orf170A2RU37 121 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 NAPSAO96009 420 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 IGHV3-13P01766 116 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 GSTT2P0CG29 244 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 OR5H8P0DN80 308 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 DUSP1P28562 367 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 RAP2BP61225 183 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 PPP1R1AQ13522 171 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 SLC22A25Q6T423 547 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 DHRS11Q6UWP2 260 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 POC1AQ8NBT0 407 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 UXS1Q8NBZ7 420 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 ZNF2Q9BSG1 426 aaPredicted RBP18.67■□□□□ 0.58
PTPN13-205ENST00000502971 C5orf66Q9H5L9 145 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 PIPOXQ9P0Z9 390 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 MEMO1Q9Y316 297 aa18.67■□□□□ 0.58
PTPN13-205ENST00000502971 OR5H14A6NHG9 310 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 F5H5P2 479 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 DEGS1O15121 323 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 AKR1C4P17516 323 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 CD40P25942 277 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 CD34P28906 385 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 DHODHQ02127 395 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 TMEM128Q5BJH2 165 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 ZNF660Q6AZW8 331 aaPredicted RBP18.66■□□□□ 0.58
PTPN13-205ENST00000502971 Q6P435 159 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 ST6GALNAC3Q8NDV1 305 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 OR2T35Q8NGX2 323 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 DHRS9Q9BPW9 319 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 MSL2Q9HCI7 577 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 DECR2Q9NUI1 292 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 ATRXP46100 2492 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 TRAV24A0A0B4J272 114 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 TRGV8A0A0C4DH27 118 aa18.66■□□□□ 0.58
PTPN13-205ENST00000502971 GOSR2O14653 212 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms