RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PRICKLE2Q7Z3G6 844 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 SCD5Q86SK9 330 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 AMZ2Q86W34 360 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 H1FOOQ8IZA3 346 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CFAP74Q9C0B2 1584 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 SDCBPO00560 298 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 RPS23P62266 143 aaKnown RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CDC14CA4D256 554 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CCNL1Q9UK58 526 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 OR1A2Q9Y585 309 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 KLRG2A4D1S0 409 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 ARRDC5A6NEK1 342 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 SDC1P18827 310 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 MKXQ8IYA7 352 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 HSPB6O14558 160 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 ATP1B2P14415 290 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 RRADP55042 308 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CATR1Q13166 79 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CHST6Q9GZX3 395 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CHST8Q9H2A9 424 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 TMEFF2Q9UIK5 374 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 C2orf72A6NCS6 295 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 OR11H12B2RN74 326 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 CD1CP29017 333 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 GLIPR1L1Q6UWM5 242 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 OR11H1Q8NG94 326 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 OR11H2Q8NH07 326 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 C20orf144Q9BQM9 153 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 QTRT1Q9BXR0 403 aaKnown RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 UBE2L5PA0A1B0GUS4 154 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 HOXA3O43365 443 aaPredicted RBP4.26□□□□□ -1.73
NEAT1-202ENST00000501122 DUX1O43812 170 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 TNFSF9P41273 254 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 TEX38Q6PEX7 206 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 STAC2Q6ZMT1 411 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 DUX5Q96PT3 197 aa4.26□□□□□ -1.73
NEAT1-202ENST00000501122 ZNF860A6NHJ4 632 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR10G4Q8NGN3 311 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 NMNAT3Q96T66 252 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 NPY6RQ99463 290 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 HDHD3Q9BSH5 251 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 MRIQ9BWK5 157 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 HLA-DQA1P01909 254 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 TSPOP30536 169 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 APOBEC3AP31941 199 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SUSD6Q92537 303 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ZNF707Q96C28 371 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SPATA31A1Q5TZJ5 1347 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SPATA31A5Q5VU36 1347 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SPATA31A7Q8IWB4 1347 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 METTL7BQ6UX53 244 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR51E1Q8TCB6 317 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 EIF3IQ13347 325 aaKnown RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 FAM98CQ17RN3 349 aaKnown RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 LIMS2Q7Z4I7 341 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR8B2Q96RD0 313 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 RNF39Q9H2S5 420 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 CALHM2Q9HA72 323 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 C10orf71Q711Q0 1435 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 AREGP15514 252 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 FBXW9Q5XUX1 488 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR10G9Q8NGN4 311 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR10G7Q8NGN6 311 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 NUDT8Q8WV74 236 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ST6GALNAC4Q9H4F1 302 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 NTNG1Q9Y2I2 539 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 CLEC4DQ8WXI8 215 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 INO80Q9ULG1 1556 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ASAH2BP0C7U1 165 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SP6Q3SY56 376 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SMG9Q9H0W8 520 aaKnown RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 PLPP2O43688 288 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 DLX2Q07687 328 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 HTR6P50406 440 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 RELBQ01201 579 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR5AS1Q8N127 324 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ACER1Q8TDN7 264 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 HRASLS2Q9NWW9 162 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 YAF2Q8IY57 180 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 EDARADDQ8WWZ3 215 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SSBP3Q9BWW4 388 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SCN9AQ15858 1988 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SMAD7O15105 426 aaKnown RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 CD74P04233 296 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 RND3P61587 244 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 MS4A13Q5J8X5 152 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 IGSF21Q96ID5 467 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 IGHA2P01877 340 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 OR9G9P0C7N8 305 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SRFP11831 508 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 FUT3P21217 361 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 UGGT2Q9NYU1 1516 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 RGRP47804 291 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 PXNP49023 591 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 GAS1P54826 345 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 WDR76Q9H967 626 aa4.25□□□□□ -1.73
NEAT1-202ENST00000501122 ATXN7O15265 892 aaPredicted RBP4.25□□□□□ -1.73
NEAT1-202ENST00000501122 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms