RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 ACSM3Q53FZ2 586 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 LIPKQ5VXJ0 399 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 NCR3LG1Q68D85 454 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 CRIP3Q6Q6R5 217 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 C1orf122Q6ZSJ8 110 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 PDZD9Q8IXQ8 264 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 BCL6BQ8N143 479 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-234ENST00000497758 JAGN1Q8N5M9 183 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 NR1H4Q96RI1 486 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-234ENST00000497758 NKX3-1Q99801 234 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-234ENST00000497758 CHST6Q9GZX3 395 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 METTL9Q9H1A3 318 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 NOX4Q9NPH5 578 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 ING4Q9UNL4 249 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 FOXJ3Q9UPW0 622 aa9.66□□□□□ -0.86
MRPL55-234ENST00000497758 TMEM82A0PJX8 343 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 TRIM77I1YAP6 450 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 MGST3O14880 152 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 DEGS1O15121 323 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 GPX5O75715 221 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 CDRT1O95170 752 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 VENTXO95231 258 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 HTR3BO95264 441 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 OR2H2O95918 312 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 CSTBP04080 98 aaKnown RBP9.65□□□□□ -0.86
MRPL55-234ENST00000497758 MAS1P04201 325 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 GABARAPL2P60520 117 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 MLLT11Q13015 90 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-234ENST00000497758 TBCEQ15813 527 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-234ENST00000497758 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 RUSC1-AS1Q66K80 236 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 TMEM200BQ69YZ2 307 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 ELP2Q6IA86 826 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 ZNF367Q7RTV3 350 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 NKAIN3Q8N8D7 197 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 CHST4Q8NCG5 386 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 OR10K1Q8NGX5 313 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 TMEM203Q969S6 136 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 ZDHHC16Q969W1 377 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 MDFIQ99750 246 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 TCF7L1Q9HCS4 588 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 ISYNA1Q9NPH2 558 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 PCDHB16Q9NRJ7 776 aa9.65□□□□□ -0.86
MRPL55-234ENST00000497758 hADV38S2A0JD32 116 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 FUOMA2VDF0 154 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 MEGF11A6BM72 1044 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 MAGEA13PA6NCF6 341 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 ZNF780AO75290 641 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-234ENST00000497758 PRTN3P24158 256 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
MRPL55-234ENST00000497758 OR3A1P47881 315 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 BAMBIQ13145 260 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 TPBGQ13641 420 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 INSL4Q14641 139 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 TRAM1Q15629 374 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 SLC22A6Q4U2R8 563 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 METAP1DQ6UB28 335 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-234ENST00000497758 C17orf107Q6ZR85 190 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 CEACAM19Q7Z692 300 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 SVOPQ8N4V2 548 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 Q8N7P7 452 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 OR4S1Q8NGB4 309 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 MUL1Q969V5 352 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 MGLLQ99685 303 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 C19orf24Q9BVV8 132 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 SLITRK2Q9H156 845 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 PPA2Q9H2U2 334 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 MRPS28Q9Y2Q9 187 aaKnown RBP9.64□□□□□ -0.87
MRPL55-234ENST00000497758 FAM96BQ9Y3D0 163 aa9.64□□□□□ -0.87
MRPL55-234ENST00000497758 PIN1P1O15428 100 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 PSPNO60542 156 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 MRPS14O60783 128 aaKnown RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ZNF728P0DKX0 622 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 CCL3L1P16619 93 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 CPEP16870 476 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 SERPINA2P20848 420 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 P2RX3P56373 397 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 PRB3Q04118 309 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 KLRD1Q13241 179 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 GPR176Q14439 515 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ZNF273Q14593 569 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 IL13RA2Q14627 380 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 PIGYQ3MUY2 71 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 HSD17B12Q53GQ0 312 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 PAN3Q58A45 887 aaKnown RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ASCL4Q6XD76 172 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 TRAPPC6BQ86SZ2 158 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 CDH26Q8IXH8 852 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 OSR2Q8N2R0 312 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ZFAND2BQ8WV99 257 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 PHYHIPQ92561 330 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ZNF48Q96MX3 618 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 YTHDF1Q9BYJ9 559 aaKnown RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 HEXA-AS1Q9H8Q6 139 aa9.63□□□□□ -0.87
MRPL55-234ENST00000497758 UNKLQ9H9P5 680 aaKnown RBP9.63□□□□□ -0.87
MRPL55-234ENST00000497758 ZMAT3Q9HA38 289 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms