RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 EPHA1P21709 976 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 IL12BP29460 328 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 GNB2P62879 340 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 NKX2-4Q9H2Z4 354 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 LIME1Q9H400 295 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 FAM60AQ9NP50 221 aa11.43□□□□□ -0.58
GAPVD1-220ENST00000497580 PHF3Q92576 2039 aaKnown RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 FCGR2AP12318 317 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 TESK1Q15569 626 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF787Q6DD87 383 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 OOSP2Q86WS3 158 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ARHGEF39Q8N4T4 335 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 MMABQ96EY8 250 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 PARD6AQ9NPB6 346 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 H3BML4 177 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 H7BYZ3 331 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ANGPTL7O43827 346 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 CEACAM1P13688 526 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 IL13RA2Q14627 380 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 TMEM187Q14656 261 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 DNM1P34Q6PK57 102 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 WDFY1Q8IWB7 410 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 LIPHQ8WWY8 451 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 TUBG2Q9NRH3 451 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 POLR3KQ9Y2Y1 108 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ARHGAP21Q5T5U3 1957 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 TOX3O15405 576 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 UCP3P55916 312 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF121P58317 390 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 CXorf66Q5JRM2 361 aaPredicted RBP11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 DCAF10Q5QP82 559 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 NUP54Q7Z3B4 507 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 POC1BQ8TC44 478 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 NEK7Q8TDX7 302 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 SLC2A9Q9NRM0 540 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF581Q9P0T4 197 aa11.42□□□□□ -0.58
GAPVD1-220ENST00000497580 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 METTL15P1P0C7V9 234 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 TNFSF10P50591 281 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 OR8B12Q8NGG6 310 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 TSLPQ969D9 159 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 C1orf147Q96MC9 270 aaPredicted RBP11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 UBE2J1Q9Y385 318 aaPredicted RBP11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF43P17038 809 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 GPR3P46089 330 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 GALR1P47211 349 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 FAM90A2PQ658T7 463 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 DNAJC4Q9NNZ3 241 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF319Q9P2F9 582 aa11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 THAP10Q9P2Z0 257 aaPredicted RBP11.41□□□□□ -0.58
GAPVD1-220ENST00000497580 CCDC85CA6NKD9 419 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 HPRT1P00492 218 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 MRPS11P82912 194 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 KISS1Q15726 138 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 MYPOPQ86VE0 399 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 SLC38A9Q8NBW4 561 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RNASEH2CQ8TDP1 164 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RHBDD1Q8TEB9 315 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 MS4A10Q96PG2 267 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RSG1Q9BU20 258 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 LPAR2Q9HBW0 351 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 GLRX2Q9NS18 164 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 NAGKQ9UJ70 344 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 SLC17A4Q9Y2C5 497 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 UNC13CQ8NB66 2214 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 A0A1B0GW64 132 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 PLPP3O14495 311 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 HBE1P02100 147 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 BIDP55957 195 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 CALHM1Q8IU99 346 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF100Q8IYN0 542 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RNF133Q8WVZ7 376 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 WWTR1Q9GZV5 400 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 PCNX3Q9H6A9 2034 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 AQP7O14520 342 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 MSTNO14793 375 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RER1O15258 196 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 GZMHP20718 246 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 ZNF41P51814 821 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 MAML2Q8IZL2 1156 aaPredicted RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 DEFB119Q8N690 84 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 RPP25Q9BUL9 199 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 CDH20Q9HBT6 801 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 ANXA10Q9UJ72 324 aa11.4□□□□□ -0.58
GAPVD1-220ENST00000497580 VDAC3Q9Y277 283 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms