RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 C12orf4Q9NQ89 552 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 HEBP1Q9NRV9 189 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 IMP3Q9NV31 184 aaKnown RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 STMN3Q9NZ72 180 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SCML1Q9UN30 329 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 SLC22A13Q9Y226 551 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 POLR3HQ9Y535 204 aaPredicted RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 OR51B2Q9Y5P1 312 aa2.45□□□□□ -2.02
VPS36-206ENST00000497149 ZNF608Q9ULD9 1512 aaPredicted RBP2.45□□□□□ -2.02
VPS36-206ENST00000497149 ISPDA4D126 451 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 CCDC22O60826 627 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 APOEP02649 317 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 SNRPAP09012 282 aaKnown RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 ZNF7P17097 686 aaPredicted RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 TEAD1P28347 426 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 CSKP41240 450 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 SLCO1A2P46721 670 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 DNASE1L1P49184 302 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 RPL14P50914 215 aaKnown RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 ELF3P78545 371 aaPredicted RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 INCA1Q0VD86 236 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 MAD2L1BPQ15013 274 aaPredicted RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 PDK2Q15119 407 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 GUK1Q16774 197 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 MED27Q6P2C8 311 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 CASP12Q6UXS9 341 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 WDR31Q8NA23 367 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 ACBD4Q8NC06 268 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 ATP6V1C2Q8NEY4 427 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 OR2Z1Q8NG97 314 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 OR4M2Q8NGB6 313 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 OR2D3Q8NGH3 330 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 TCP10LQ8TDR4 215 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 AP3S1Q92572 193 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 MRPS26Q9BYN8 205 aaKnown RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 OR51B6Q9H340 312 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 KIR3DX1Q9H7L2 352 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 LINC00574Q9H8X3 128 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 DIABLOQ9NR28 239 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 SPANXB1Q9NS25 103 aaPredicted RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 C1orf109Q9NX04 203 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 BABAM2Q9NXR7 383 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 TAS2R5Q9NYW4 299 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 DHCR7Q9UBM7 475 aaKnown RBP2.44□□□□□ -2.02
VPS36-206ENST00000497149 ADGRL1O94910 1474 aa2.44□□□□□ -2.02
VPS36-206ENST00000497149 GNG14A0A1W2PPG7 69 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 FUOMA2VDF0 154 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 TMEM114B3SHH9 223 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 SMLR1H3BR10 107 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 MYL12BO14950 172 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 OR7C2O60412 319 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 GMDSO60547 372 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 UPK1BO75841 260 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 PLEKHA8P1O95397 391 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 PSMG1O95456 288 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 KLK1P06870 262 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 RHOCP08134 193 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 CD28P10747 220 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 NQO1P15559 274 aaKnown RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 CD36P16671 472 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 NELFEP18615 380 aaKnown RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 G0S2P27469 103 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 HLA-DMAP28067 261 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 HTR2CP28335 458 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 CRABP2P29373 138 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 MPV17P39210 176 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 RANBP1P43487 201 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 CAPZBP47756 277 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 IDH2P48735 452 aaKnown RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 MLF1P58340 268 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 UBE2KP61086 200 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 PPP1CAP62136 330 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 RBX1P62877 108 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 FLOT2Q14254 428 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 ZNHIT3Q15649 155 aaPredicted RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 TNXAQ16473 311 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 ACTBL2Q562R1 376 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 C16orf47Q6ZP98 133 aaPredicted RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 CCDC121Q6ZUS5 278 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 SETD3Q86TU7 594 aaPredicted RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 NT5DC3Q86UY8 548 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 FUNDC1Q8IVP5 155 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 ORMDL3Q8N138 153 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 Q8N402 240 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 SLC25A29Q8N8R3 303 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 ZNF738Q8NE65 137 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 OR10Z1Q8NGY1 313 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 OR6K2Q8NGY2 324 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 OR5AK3PQ8NH89 298 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 OR1S1Q8NH92 325 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 DNAJB3Q8WWF6 145 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 TMEM159Q96B96 161 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 SMARCD1Q96GM5 515 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 CCDC42Q96M95 316 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 PRRT1Q99946 306 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 UTP23Q9BRU9 249 aaKnown RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 PARD6GQ9BYG4 376 aaPredicted RBP2.43□□□□□ -2.02
VPS36-206ENST00000497149 TRIM4Q9C037 500 aa2.43□□□□□ -2.02
VPS36-206ENST00000497149 PORCNQ9H237 461 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms