RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 DEGS1O15121 323 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 LYRM1O43325 122 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 SSX5O60225 188 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 LHBP01229 141 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 RCVRNP35243 200 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 SNU13P55769 128 aaKnown RBP9.29□□□□□ -0.92
PKP4-215ENST00000494945 CCL8P80075 99 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 RBM39Q14498 530 aaKnown RBP9.29□□□□□ -0.92
PKP4-215ENST00000494945 OLFML2AQ68BL7 652 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 Q6P435 159 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 SULT4A1Q9BR01 284 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 FAAP24Q9BTP7 215 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 IFT46Q9NQC8 304 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 ELF5Q9UKW6 265 aaPredicted RBP9.29□□□□□ -0.92
PKP4-215ENST00000494945 ANAPC10Q9UM13 185 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 CACNG2Q9Y698 323 aa9.29□□□□□ -0.92
PKP4-215ENST00000494945 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 LRRK2Q5S007 2527 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 LINC00854A0A1B0GVQ3 168 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 FAM221AA4D161 298 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 NAP1L6A6NFF2 107 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 MCRIP1C9JLW8 97 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 WNT9BO14905 357 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 HAND1O96004 215 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 DANCRP0C864 163 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 PLA2G2AP14555 144 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 ZNF44P15621 663 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 EGR1P18146 543 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 NAT1P18440 290 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 LMO1P25800 156 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 DUSP1P28562 367 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 FAUP35544 74 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 MDH2P40926 338 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 TAS2R19P59542 299 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 GMFBP60983 142 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 MRPS15P82914 257 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 OXA1LQ15070 435 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 TRIM16LQ309B1 348 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 SHEQ5VZ18 495 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 C11orf71Q6IPW1 123 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 C1orf87Q8N0U7 546 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 ZCCHC24Q8N2G6 241 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 TMEM229BQ8NBD8 167 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 SUMF2Q8NBJ7 301 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 CMSS1Q9BQ75 279 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 C11orf54Q9H0W9 315 aaPredicted RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 WDR13Q9H1Z4 485 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 ZNF581Q9P0T4 197 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 AK3Q9UIJ7 227 aa9.28□□□□□ -0.92
PKP4-215ENST00000494945 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
PKP4-215ENST00000494945 TRAV24A0A0B4J272 114 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 POM121CA8CG34 1229 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 J3QKU1 62 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 SLC33A1O00400 549 aaPredicted RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 OR2H2O95918 312 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 CD8AP01732 235 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 AKAIN1P0CW23 69 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 TBPP20226 339 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 DTYMKP23919 212 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 TLE4Q04727 773 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 PDCD1Q15116 288 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 PAN3Q58A45 887 aaKnown RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 HOGA1Q86XE5 327 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 CENPSQ8N2Z9 138 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 VRK1Q99986 396 aaPredicted RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 TRAF4Q9BUZ4 470 aaPredicted RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 DPCDQ9BVM2 203 aaPredicted RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 RAB1BQ9H0U4 201 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 C12orf4Q9NQ89 552 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 TREM2Q9NZC2 230 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 NLKQ9UBE8 527 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 DNAJB11Q9UBS4 358 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 OR14J1Q9UGF5 321 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 EDARQ9UNE0 448 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 WIPI2Q9Y4P8 454 aa9.27□□□□□ -0.93
PKP4-215ENST00000494945 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
PKP4-215ENST00000494945 IGHV1-69-2A0A0G2JMI3 117 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 RFPL4AA6NLU0 287 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 ZNF736B4DX44 427 aaPredicted RBP9.26□□□□□ -0.93
PKP4-215ENST00000494945 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 RFPL4AL1F8VTS6 287 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 H7C1Q1 480 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 SIRPB1O00241 398 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 CD74P04233 296 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 PSG2P11465 335 aa9.26□□□□□ -0.93
PKP4-215ENST00000494945 MUC1P15941 1255 aaPredicted RBP9.26□□□□□ -0.93
PKP4-215ENST00000494945 RFX2P48378 723 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms