RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TRGC1P0CF51 173 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 ZFP36L1Q07352 338 aaKnown RBP13.3□□□□□ -0.28
SDF4-207ENST00000494748 SLC22A25Q6T423 547 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 OR10AD1Q8NGE0 317 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 TVP23CQ96ET8 276 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 CALHM2Q9HA72 323 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 UNC13CQ8NB66 2214 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 IGKV1-12A0A0C4DH73 117 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 FAM221AA4D161 298 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 IGKV1D-12P01611 117 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 FOSL1P15407 271 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 SLC35E3Q7Z769 313 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 ZDHHC12Q96GR4 267 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 RCC1LQ96I51 464 aaKnown RBP13.3□□□□□ -0.28
SDF4-207ENST00000494748 MEGF10Q96KG7 1140 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 LYRM2Q9NU23 88 aaPredicted RBP13.3□□□□□ -0.28
SDF4-207ENST00000494748 UFSP2Q9NUQ7 469 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 CD63P08962 238 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 OR5L2Q8NGL0 311 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 OR14L1PQ8NHC6 308 aa13.3□□□□□ -0.28
SDF4-207ENST00000494748 UNKLQ9H9P5 680 aaKnown RBP13.3□□□□□ -0.28
SDF4-207ENST00000494748 LOC102725191A0A1B0GVB3 256 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 A0A1B0GX78 115 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 OR5H1A6NKK0 313 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 ZNF41P51814 821 aaPredicted RBP13.29□□□□□ -0.28
SDF4-207ENST00000494748 ZNF266Q14584 549 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 PLPPR1Q8TBJ4 325 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 WSB1Q9Y6I7 421 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 TRDCB7Z8K6 153 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 AADACP22760 399 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 DDTP30046 118 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 RUNX1Q01196 453 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 RSU1Q15404 277 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 DEFB133Q30KQ1 61 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 PIGYQ3MUY2 71 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 SNIP1Q8TAD8 396 aaKnown RBP13.29□□□□□ -0.28
SDF4-207ENST00000494748 GEMIN2O14893 280 aaKnown RBP13.29□□□□□ -0.28
SDF4-207ENST00000494748 PPP1R2P9O14990 202 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 CDS2O95674 445 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 PTBP3O95758 552 aaKnown RBP13.29□□□□□ -0.28
SDF4-207ENST00000494748 CEACAM1P13688 526 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 RND2P52198 227 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 HYAL1Q12794 435 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 C10orf128Q5T292 105 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 FAM90A2PQ658T7 463 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 CPEB2Q7Z5Q1 589 aaKnown RBP13.29□□□□□ -0.28
SDF4-207ENST00000494748 ANKRD37Q7Z713 158 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
SDF4-207ENST00000494748 PNLIPP16233 465 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 NDUFB7P17568 137 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 MSR1P21757 451 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 CEBPGP53567 150 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 MTCP1P56278 107 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 OR1D5P58170 312 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 SLC25A31Q9H0C2 315 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 METTL9Q9H1A3 318 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 SDHAF3Q9NRP4 125 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 OMGP23515 440 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 PKIAP61925 76 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 GNMTQ14749 295 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 Q3ZCU0 254 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 CXorf66Q5JRM2 361 aaPredicted RBP13.28□□□□□ -0.28
SDF4-207ENST00000494748 SUMF1Q8NBK3 374 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 OR2M3Q8NG83 312 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 TMEM222Q9H0R3 208 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 SMOC1Q9H4F8 434 aa13.28□□□□□ -0.28
SDF4-207ENST00000494748 SLC31A2O15432 143 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 DYNLT3P51808 116 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 EXT1Q16394 746 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 OR2T2Q6IF00 324 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 MEX3BQ6ZN04 569 aaKnown RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 GJC3Q8NFK1 279 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 OR10G3Q8NGC4 313 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 OR10G4Q8NGN3 311 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 OR5C1Q8NGR4 320 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 TMEM56Q96MV1 263 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 PLEKHF2Q9H8W4 249 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 KLRF1Q9NZS2 232 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 CD207Q9UJ71 328 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 TMEM56-RWDD3S4R434 201 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 CHD3Q12873 2000 aaKnown RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 C3orf85A0A1B0GTC6 90 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 LOC102723971A0A1B0GUV8 181 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 MPPED1O15442 326 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 FABP4P15090 132 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 CLDN17P56750 224 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 M1APQ8TC57 530 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 CPNE4Q96A23 557 aaPredicted RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 CDCA3Q99618 268 aaPredicted RBP13.27□□□□□ -0.28
SDF4-207ENST00000494748 HIST1H2BLQ99880 126 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 CLEC1BQ9P126 229 aa13.27□□□□□ -0.28
SDF4-207ENST00000494748 GNRHRP30968 328 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms