RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
RFC4-214ENST00000494047 IGF2-ASQ6U949 168 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 FBXW12Q6X9E4 464 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 AAED1Q7RTV5 226 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 C6orf201Q7Z4U5 140 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 DMBX1Q8NFW5 382 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 OR1J1Q8NGS3 322 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 OR2V1Q8NHB1 315 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 GLYATL2Q8WU03 294 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 GNPNAT1Q96EK6 184 aaPredicted RBP9.98□□□□□ -0.81
RFC4-214ENST00000494047 KIRREL1Q96J84 757 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 FOXB1Q99853 325 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 SLC2A9Q9NRM0 540 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 B4GALT7Q9UBV7 327 aa9.98□□□□□ -0.81
RFC4-214ENST00000494047 MCTS1Q9ULC4 181 aaKnown RBP9.98□□□□□ -0.81
RFC4-214ENST00000494047 BOKQ9UMX3 212 aaPredicted RBP9.98□□□□□ -0.81
RFC4-214ENST00000494047 A0A1W2PP11 408 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 PMS2P1A4D2B8 440 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 OR5H15A6NDH6 313 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
RFC4-214ENST00000494047 SLC25A6P12236 298 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 MUC1P15941 1255 aaPredicted RBP9.97□□□□□ -0.81
RFC4-214ENST00000494047 CAMLGP49069 296 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 RBM11P57052 281 aaKnown RBP9.97□□□□□ -0.81
RFC4-214ENST00000494047 PDZK1IP1Q13113 114 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 CRIP3Q6Q6R5 217 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 MKXQ8IYA7 352 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 OR5D18Q8NGL1 313 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 OR51F2Q8NH61 342 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 OR14L1PQ8NHC6 308 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 C18orf12Q96KH6 178 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 ZNF385AQ96PM9 386 aaKnown RBP9.97□□□□□ -0.81
RFC4-214ENST00000494047 C1QTNF5Q9BXJ0 243 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 OR2H1Q9GZK4 316 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 EGLN1Q9GZT9 426 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 TLNRD1Q9H1K6 362 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 GPR173Q9NS66 373 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 ABI3Q9P2A4 366 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 AK3Q9UIJ7 227 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 RNF150Q9ULK6 438 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 AMDHD2Q9Y303 409 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 HS3ST3B1Q9Y662 390 aa9.97□□□□□ -0.81
RFC4-214ENST00000494047 AKAP13Q12802 2813 aa9.96□□□□□ -0.81
RFC4-214ENST00000494047 IGKV3D-15A0A087WSY6 115 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 CLEC18AA5D8T8 446 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 C1orf196B1AJZ1 125 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 NUPL2O15504 423 aaKnown RBP9.96□□□□□ -0.82
RFC4-214ENST00000494047 CYTIPO60759 359 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 RAMP1O60894 148 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 PITX3O75364 302 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 HBE1P02100 147 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 CCL3P10147 92 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 MYF5P13349 255 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 PRKACAP17612 351 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 SNCAP37840 140 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 PLCXD3Q63HM9 321 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 MOB1BQ7L9L4 216 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 C1QL2Q7Z5L3 287 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 CMTM1Q8IZ96 169 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 ZNF561Q8N587 486 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 ZIC4Q8N9L1 334 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 CLEC18CQ8NCF0 446 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 FBXO17Q96EF6 278 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 LIN37Q96GY3 246 aaPredicted RBP9.96□□□□□ -0.82
RFC4-214ENST00000494047 TAAR9Q96RI9 348 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 STRADBQ9C0K7 418 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 ACKR4Q9NPB9 350 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.82
RFC4-214ENST00000494047 LSM5Q9Y4Y9 91 aaKnown RBP9.96□□□□□ -0.82
RFC4-214ENST00000494047 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.82
RFC4-214ENST00000494047 CCDC187A0A096LP49 1063 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 A0A0J9YW62 118 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 FAM230AA0A1W2PPH8 454 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 ZNF716A6NP11 495 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 RPL36A-HNRNPH2H7BZ11 118 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 TNFSF11O14788 317 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 DFFBO76075 338 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
RFC4-214ENST00000494047 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
RFC4-214ENST00000494047 UMODP07911 640 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 PI3P19957 117 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 LPAR6P43657 344 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 ZFP36L1Q07352 338 aaKnown RBP9.95□□□□□ -0.82
RFC4-214ENST00000494047 TAF9Q16594 264 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 HYAL4Q2M3T9 481 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 SLC22A25Q6T423 547 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 ZNF565Q8N9K5 539 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 OR10AD1Q8NGE0 317 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 NPRL2Q8WTW4 380 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 RBMXL1Q96E39 390 aaKnown RBP9.95□□□□□ -0.82
RFC4-214ENST00000494047 TMEM56Q96MV1 263 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 TMEM222Q9H0R3 208 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 ZNF442Q9H7R0 627 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 CRLF2Q9HC73 371 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 TMEM56-RWDD3S4R434 201 aa9.95□□□□□ -0.82
RFC4-214ENST00000494047 NCOA6Q14686 2063 aaPredicted RBP9.95□□□□□ -0.82
RFC4-214ENST00000494047 ASPMQ8IZT6 3477 aa9.94□□□□□ -0.82
RFC4-214ENST00000494047 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms