RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CD200P41217 278 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 OR3A3P47888 321 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 NPBWR2P48146 333 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 SPICQ8N5J4 248 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 TLNRD1Q9H1K6 362 aa11.94□□□□□ -0.5
PDZRN3-210ENST00000492909 LINC00862A6NCI5 91 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 A6NLC8 198 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 G3V3Q6 166 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 M0R233 179 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 SLC22A5O76082 557 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 NDUFB6O95139 128 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 COL8A1P27658 744 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF672Q499Z4 452 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 Q8IYB0 196 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 FBXL14Q8N1E6 418 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 CHST4Q8NCG5 386 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 LILRB1Q8NHL6 650 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 ANGPTL6Q8NI99 470 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 RAB3CQ96E17 227 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 DHRS9Q9BPW9 319 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 RHOFQ9HBH0 211 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 ST3GAL6Q9Y274 331 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 ABCA4P78363 2273 aa11.93□□□□□ -0.5
PDZRN3-210ENST00000492909 PKDREJQ9NTG1 2253 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 SNRPGP15A8MWD9 76 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PRSS44E7EML9 344 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 H7C417 338 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 SOCS1O15524 211 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 RBBP9O75884 186 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 TNFSF4P23510 183 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 GABRR1P24046 479 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 P2RX3P56373 397 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 FGF12P61328 243 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 EFNB3Q15768 340 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PIGYQ3MUY2 71 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 POM121Q96HA1 1249 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 CITED4Q96RK1 184 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 SEC22CQ9BRL7 303 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ZMAT3Q9HA38 289 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 MTFP1Q9UDX5 166 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 B9A039 149 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 F8VVB4 439 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 F8VWA3 439 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ADH4P08319 380 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 BLVRBP30043 206 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 PRSS3P35030 304 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 MPPED2Q15777 294 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 TAF9Q16594 264 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 CDNFQ49AH0 187 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ESCO2Q56NI9 601 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 NHLRC3Q5JS37 347 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF626Q68DY1 528 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 C11orf53Q8IXP5 236 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 FAM58AQ8N1B3 248 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 MEGF10Q96KG7 1140 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 KLF2Q9Y5W3 355 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 AUP1Q9Y679 476 aa11.92□□□□□ -0.5
PDZRN3-210ENST00000492909 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 CACNA1DQ01668 2161 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 TMEM235A6NFC5 223 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 C17orf100A8MU93 164 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 CSF1P09603 554 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 GNB3P16520 340 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 TMEM50BP56557 158 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 DHODHQ02127 395 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ARL6IP1Q15041 203 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF260Q3ZCT1 412 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 FAAP20Q6NZ36 180 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ZNF826PQ6ZT77 177 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 ITLN1Q8WWA0 313 aa11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-210ENST00000492909 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms