RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 LRRTM1Q86UE6 522 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 C8orf46Q8TAG6 207 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 TBC1D15Q8TC07 691 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 UPRTQ96BW1 309 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 NDUFB11Q9NX14 153 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 KPTNQ9Y664 436 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 IGHV3OR16-10A0A075B7F0 116 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 A0A087WXM4 84 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 A0A1W2PPH5 198 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 GTF2F2P13984 249 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 EPHA1P21709 976 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 LMO1P25800 156 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 CALRP27797 417 aaKnown RBP11.52□□□□□ -0.57
CCM2-217ENST00000492883 EDDM3AQ14507 147 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 OR8H2Q8N162 312 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 OSR2Q8N2R0 312 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 OR4D6Q8NGJ1 314 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 VCX3AQ9NNX9 186 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 IL36GQ9NZH8 169 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 NUP50Q9UKX7 468 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 ST3GAL6Q9Y274 331 aa11.52□□□□□ -0.57
CCM2-217ENST00000492883 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
CCM2-217ENST00000492883 A0A0G2JK05 382 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 PSPNO60542 156 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 MMP9P14780 707 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 FPR2P25090 351 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 KLF17Q5JT82 389 aaPredicted RBP11.51□□□□□ -0.57
CCM2-217ENST00000492883 SYT6Q5T7P8 510 aaPredicted RBP11.51□□□□□ -0.57
CCM2-217ENST00000492883 TMEM200BQ69YZ2 307 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 Q6P435 159 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 CHST4Q8NCG5 386 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 Q8NFD4 153 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 OR4S1Q8NGB4 309 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
CCM2-217ENST00000492883 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
CCM2-217ENST00000492883 AK6Q9Y3D8 172 aaKnown RBP11.51□□□□□ -0.57
CCM2-217ENST00000492883 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 A0A1W2PP11 408 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 M0R1W7 72 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 MGST3O14880 152 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 FSHBP01225 129 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 GALP22466 123 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 OR3A1P47881 315 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 PRIMA1Q86XR5 153 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 LYPD6Q86Y78 171 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 LHX4Q969G2 390 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 MRPS24Q96EL2 167 aaKnown RBP11.5□□□□□ -0.57
CCM2-217ENST00000492883 PPA2Q9H2U2 334 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 PLGRKTQ9HBL7 147 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 ING3Q9NXR8 418 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
CCM2-217ENST00000492883 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 A0A1W2PPE2 198 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 A0A1W2PR64 198 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 hADV38S2A0JD32 116 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 HSPB6O14558 160 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 PDCD5O14737 125 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 OR7C1O76099 320 aaPredicted RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 UBBP0CG47 229 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 MYL9P24844 172 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 HTR2CP28335 458 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 PSMD7P51665 324 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 RBM11P57052 281 aaKnown RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 TAF9Q16594 264 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 PAN3Q58A45 887 aaKnown RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 C22orf42Q6IC83 251 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 C1orf122Q6ZSJ8 110 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 TPRX1Q8N7U7 411 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 BANF2Q9H503 90 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 METTL8Q9H825 291 aaKnown RBP11.49□□□□□ -0.57
CCM2-217ENST00000492883 SIRT7Q9NRC8 400 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 STUB1Q9UNE7 303 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 SSR3Q9UNL2 185 aa11.49□□□□□ -0.57
CCM2-217ENST00000492883 TEP1Q99973 2627 aaKnown RBP11.48□□□□□ -0.57
CCM2-217ENST00000492883 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms