RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 GSTK1Q9Y2Q3 226 aa10.97□□□□□ -0.65
COL6A3-211ENST00000491233 KIAA2026Q5HYC2 2103 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 IGKV1-12A0A0C4DH73 117 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 J3QRE1 110 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 OR2H2O95918 312 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 IGKV1D-12P01611 117 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 ALPLP05186 524 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 HTR1DP28221 377 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 ERP29P30040 261 aaKnown RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 VDAC2P45880 294 aaPredicted RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 PDZK1IP1Q13113 114 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 BAIAP2L2Q6UXY1 529 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 Q6ZS46 218 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 ZBTB49Q6ZSB9 765 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 RNF144BQ7Z419 303 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 OR51A4Q8NGJ6 313 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 OR4P4Q8NGL7 312 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 OR13C3Q8NGS6 347 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 HRASLS5Q96KN8 279 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 CITED2Q99967 270 aaPredicted RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 WNT10AQ9GZT5 417 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 UBE2J1Q9Y385 318 aaPredicted RBP10.96□□□□□ -0.65
COL6A3-211ENST00000491233 ORC6Q9Y5N6 252 aa10.96□□□□□ -0.65
COL6A3-211ENST00000491233 TRGV10A0A0A0MS01 117 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 FAM172BPA6NC97 362 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 J3QLW9 94 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 KDM4BO94953 1096 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 PRB2P02812 416 aaPredicted RBP10.95□□□□□ -0.66
COL6A3-211ENST00000491233 ALDOBP05062 364 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF19P17023 458 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 CCR9P51686 369 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
COL6A3-211ENST00000491233 BLCAPP62952 87 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 IL18R1Q13478 541 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 ZIK1Q3SY52 487 aaPredicted RBP10.95□□□□□ -0.66
COL6A3-211ENST00000491233 MEDAGQ5VYS4 303 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 PELI1Q96FA3 418 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 C4orf36Q96KX1 117 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 MMP28Q9H239 520 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 GAL3ST2Q9H3Q3 398 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 NEK6Q9HC98 313 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 AASSQ9UDR5 926 aa10.95□□□□□ -0.66
COL6A3-211ENST00000491233 FUOMA2VDF0 154 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 FAM90A22PA8MWA6 464 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 SH2D1BO14796 132 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF44P15621 663 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 CDK2P24941 298 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 GDNFP39905 211 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 AESQ08117 197 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 ALKBH1Q13686 389 aaKnown RBP10.94□□□□□ -0.66
COL6A3-211ENST00000491233 SLC25A30Q5SVS4 291 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 OR52W1Q6IF63 320 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 ACBD7Q8N6N7 88 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 LGALS12Q96DT0 336 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 ALG8Q9BVK2 526 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 COMMD4Q9H0A8 199 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 PCDHGB5Q9Y5G0 923 aa10.94□□□□□ -0.66
COL6A3-211ENST00000491233 SNTNA6NMZ2 147 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 E9PQ18 207 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 H3BNX3 289 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 XPNPEP2O43895 674 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 MT-ND2P03891 347 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 HCKP08631 526 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 CD24P25063 80 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 GLIPR1P48060 266 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ALDH3A2P51648 485 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 EMX1Q04741 257 aaPredicted RBP10.93□□□□□ -0.66
COL6A3-211ENST00000491233 SCN1BQ07699 218 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ATXN7L3Q14CW9 347 aaPredicted RBP10.93□□□□□ -0.66
COL6A3-211ENST00000491233 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 HEPN1Q6WQI6 88 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 RTN4RL2Q86UN3 420 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 SAXO1Q8IYX7 474 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ABHD12Q8N2K0 398 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF596Q8TC21 504 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 COQ2Q96H96 371 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ZCCHC4Q9H5U6 513 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF286AQ9HBT8 521 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 ING3Q9NXR8 418 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 TAS2R3Q9NYW6 316 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
COL6A3-211ENST00000491233 EXOGQ9Y2C4 368 aaKnown RBP10.93□□□□□ -0.66
COL6A3-211ENST00000491233 A0A1W2PRX2 142 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 ODAMA1E959 279 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
COL6A3-211ENST00000491233 IGLV1-47P01700 117 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 CSN2P05814 226 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
COL6A3-211ENST00000491233 LMO1P25800 156 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 CD34P28906 385 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms