RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SLC22A6Q4U2R8 563 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 GLIPR1L1Q6UWM5 242 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 OR4S1Q8NGB4 309 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 OR4M1Q8NGD0 313 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 NR1H4Q96RI1 486 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 CHST6Q9GZX3 395 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 FAM234AQ9H0X4 552 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 A0A0G2JK05 382 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SLC33A1O00400 549 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 ARL6IP5O75915 188 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 HTR3BO95264 441 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 LIPFP07098 398 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SMIM18P0DKX4 95 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 PPIAL4GP0DN37 164 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SRD5A1P18405 259 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 HNF1AP20823 631 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SERPINA2P20848 420 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 GALP22466 123 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 LMO1P25800 156 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 ARF6P62330 175 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 C1orf100Q5SVJ3 147 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 AWAT2Q6E213 333 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 C22orf42Q6IC83 251 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 OR8H2Q8N162 312 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TMEM104Q8NE00 496 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TBC1D15Q8TC07 691 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 UPRTQ96BW1 309 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SNX22Q96L94 193 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SIRPDQ9H106 197 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 EXOSC4Q9NPD3 245 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 AK6Q9Y3D8 172 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SH2D1BO14796 132 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SLC22A1O15245 554 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 GABRR1P24046 479 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 BMXP51813 675 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 DLX1P56177 255 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 RBM11P57052 281 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SCN1BQ07699 218 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 NHLRC3Q5JS37 347 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TCF23Q7RTU1 214 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 OSR2Q8N2R0 312 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 Q8N7P7 452 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 SLC25A28Q96A46 364 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 OR51E2Q9H255 320 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 TXNL4BQ9NX01 149 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 ST3GAL6Q9Y274 331 aa11.84□□□□□ -0.51
SRGAP3-208ENST00000490348 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 GEMIN2O14893 280 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 ZNF44P15621 663 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 OR10A3P58181 314 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 ZNF273Q14593 569 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 IL13RA2Q14627 380 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 GRK1Q15835 563 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 GLT8D1Q68CQ7 371 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 NR2C2APQ86WQ0 139 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 CYYR1Q96J86 154 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 S100A13Q99584 98 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 SLITRK2Q9H156 845 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 ONECUT1Q9UBC0 465 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 GLS2Q9UI32 602 aa11.83□□□□□ -0.52
SRGAP3-208ENST00000490348 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 DEGS1O15121 323 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 ZNF780AO75290 641 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 CSTBP04080 98 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 GTF2F2P13984 249 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 CD36P16671 472 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 JUNBP17275 347 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 GADD45AP24522 165 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 QRFPP83859 136 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 PRB3Q04118 309 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 EDDM3AQ14507 147 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 FAM185AQ8N0U4 392 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 C11orf42Q8N5U0 333 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 FOXRED1Q96CU9 486 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 DMRTB1Q96MA1 342 aa11.82□□□□□ -0.52
SRGAP3-208ENST00000490348 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms