RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 NPTNQ9Y639 398 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 DOPEY1Q5JWR5 2465 aa17.57■□□□□ 0.4
SND1-214ENST00000489417 ANKRD20A5PA0PJZ0 165 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.56■□□□□ 0.4
SND1-214ENST00000489417 HAND1O96004 215 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 SOD3P08294 240 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 CSF1P09603 554 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 RCVRNP35243 200 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 CBX5P45973 191 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 DCDC5Q6ZRR9 648 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 COX4I2Q96KJ9 171 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 VRK1Q99986 396 aaPredicted RBP17.56■□□□□ 0.4
SND1-214ENST00000489417 TRAF4Q9BUZ4 470 aaPredicted RBP17.56■□□□□ 0.4
SND1-214ENST00000489417 C11orf54Q9H0W9 315 aaPredicted RBP17.56■□□□□ 0.4
SND1-214ENST00000489417 IFT46Q9NQC8 304 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 TAS2R8Q9NYW2 309 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 TREM2Q9NZC2 230 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 DNAJB11Q9UBS4 358 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 OR14J1Q9UGF5 321 aa17.56■□□□□ 0.4
SND1-214ENST00000489417 TRAV24A0A0B4J272 114 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 UBE2QL1A1L167 161 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 FAM221AA4D161 298 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 LRRC30A6NM36 301 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 VGLL3A8MV65 326 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 MCRIP1C9JLW8 97 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CLDN1O95832 211 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 OR2H2O95918 312 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CYB5R3P00387 301 aaPredicted RBP17.55■□□□□ 0.4
SND1-214ENST00000489417 GLAP06280 429 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CD80P33681 288 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 DYRK1AQ13627 763 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 SUMF2Q8NBJ7 301 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CMSS1Q9BQ75 279 aaKnown RBP17.55■□□□□ 0.4
SND1-214ENST00000489417 NLKQ9UBE8 527 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 WIPI2Q9Y4P8 454 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CACNG2Q9Y698 323 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 SIRPB1O00241 398 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 LYRM1O43325 122 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 PTTG1O95997 202 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 FCER2P06734 321 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 MRPS15P82914 257 aaKnown RBP17.55■□□□□ 0.4
SND1-214ENST00000489417 MZT2BQ6NZ67 158 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 TGIF2LYQ8IUE0 185 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 DYRK2Q92630 601 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 RDH5Q92781 318 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 OCSTAMPQ9BR26 566 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 C7orf50Q9BRJ6 194 aaKnown RBP17.55■□□□□ 0.4
SND1-214ENST00000489417 ZNF107Q9UII5 783 aaPredicted RBP17.55■□□□□ 0.4
SND1-214ENST00000489417 ANAPC10Q9UM13 185 aa17.55■□□□□ 0.4
SND1-214ENST00000489417 CHD3Q12873 2000 aaKnown RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 A1L4Q6 167 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 IFNL4K9M1U5 179 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 HPXP02790 462 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 CEBPDP49716 269 aaPredicted RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 TLE4Q04727 773 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 RBM39Q14498 530 aaKnown RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 PAN3Q58A45 887 aaKnown RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 GVQW1Q8N7I0 195 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 TMEM229BQ8NBD8 167 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 NEK7Q8TDX7 302 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 CHPT1Q8WUD6 406 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 HDHD3Q9BSH5 251 aaPredicted RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 DPCDQ9BVM2 203 aaPredicted RBP17.54■□□□□ 0.4
SND1-214ENST00000489417 RAB1BQ9H0U4 201 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 DCAF16Q9NXF7 216 aa17.54■□□□□ 0.4
SND1-214ENST00000489417 IGHV3OR15-7A0A075B7D8 119 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 RFPL4AA6NLU0 287 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 CENPXA8MT69 81 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 RFPL4AL1F8VTS6 287 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 SLC33A1O00400 549 aaPredicted RBP17.53■□□□□ 0.4
SND1-214ENST00000489417 HSPB6O14558 160 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 PSG2P11465 335 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 COX6B1P14854 86 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 TAS2R19P59542 299 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 OXA1LQ15070 435 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 TRIM16LQ309B1 348 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 FAM201AQ5SY85 155 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 C1orf87Q8N0U7 546 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 MINDY2Q8NBR6 621 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 CACNG6Q9BXT2 260 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 SEBOXQ9HB31 216 aaPredicted RBP17.53■□□□□ 0.4
SND1-214ENST00000489417 HRASLSQ9HDD0 168 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 TMEM106BQ9NUM4 274 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 LAMP3Q9UQV4 416 aa17.53■□□□□ 0.4
SND1-214ENST00000489417 FLNCQ14315 2725 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 IGHV1-69-2A0A0G2JMI3 117 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 OR2AT4A6NND4 320 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 NAT1P18440 290 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 DTYMKP23919 212 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 LMO1P25800 156 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 PRDX2P32119 198 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 RFX2P48378 723 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 SP5Q6BEB4 398 aaPredicted RBP17.52■□□□□ 0.4
SND1-214ENST00000489417 GDPD3Q7L5L3 318 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 HOGA1Q86XE5 327 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 CENPSQ8N2Z9 138 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 BPIFB2Q8N4F0 458 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 OR5T2Q8NGG2 359 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 DEDD2Q8WXF8 326 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 CHST6Q9GZX3 395 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms