RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 DEGS1O15121 323 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 PSPNO60542 156 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 OR2H2O95918 312 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 PPIAL4GP0DN37 164 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 FGF9P31371 208 aaPredicted RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 ARF6P62330 175 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 C22orf42Q6IC83 251 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 OSR2Q8N2R0 312 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 OR4S1Q8NGB4 309 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 TBC1D15Q8TC07 691 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 DMRTB1Q96MA1 342 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 MRI1Q9BV20 369 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 OR51E2Q9H255 320 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
FDPS-213ENST00000489003 STUB1Q9UNE7 303 aa12.51□□□□□ -0.41
FDPS-213ENST00000489003 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 TRAV1-2A0A0B4J238 106 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 CSTBP04080 98 aaKnown RBP12.5□□□□□ -0.41
FDPS-213ENST00000489003 CD36P16671 472 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 SERPINA2P20848 420 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 GPR176Q14439 515 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 IL13RA2Q14627 380 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 PIGYQ3MUY2 71 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 OR4M1Q8NGD0 313 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 OR5D13Q8NGL4 314 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 CHST6Q9GZX3 395 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 SSR3Q9UNL2 185 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 ST3GAL6Q9Y274 331 aa12.5□□□□□ -0.41
FDPS-213ENST00000489003 TRBV23-1A0A0A0MS06 115 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 SLC33A1O00400 549 aaPredicted RBP12.49□□□□□ -0.41
FDPS-213ENST00000489003 SMIM18P0DKX4 95 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 GTF2F2P13984 249 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 ZNF44P15621 663 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 HNF1AP20823 631 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 GABRR1P24046 479 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 GADD45AP24522 165 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 HTR2CP28335 458 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 NHLRC3Q5JS37 347 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 TMEM200BQ69YZ2 307 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
FDPS-213ENST00000489003 OR8H2Q8N162 312 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 TMEM104Q8NE00 496 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 PPP1R35Q8TAP8 253 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 SIRPDQ9H106 197 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 BANF2Q9H503 90 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 VCX3AQ9NNX9 186 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 C19orf12Q9NSK7 152 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 GHRLQ9UBU3 117 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 V9GY05 133 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
FDPS-213ENST00000489003 NIPBLQ6KC79 2804 aaeCLIP12.49□□□□□ -0.41
FDPS-213ENST00000489003 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 GEMIN2O14893 280 aaKnown RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 SLC22A1O15245 554 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 FSHBP01225 129 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 VSIG8P0DPA2 414 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 MMP9P14780 707 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 SRP14P37108 136 aaKnown RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 OR3A1P47881 315 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 PSMD7P51665 324 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 RBM11P57052 281 aaKnown RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 RPL31P62899 125 aaKnown RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 GRK1Q15835 563 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 KLF17Q5JT82 389 aaPredicted RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 FAM185AQ8N0U4 392 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 CHST4Q8NCG5 386 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 NANPQ8TBE9 248 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 UPRTQ96BW1 309 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
FDPS-213ENST00000489003 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 TBX15Q96SF7 602 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 RNF167Q9H6Y7 350 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 ZNF581Q9P0T4 197 aa12.48□□□□□ -0.41
FDPS-213ENST00000489003 A0A1W2PQ09 198 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 SLC17A2O00624 439 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 PDCD5O14737 125 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 MGST3O14880 152 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 TOX4O94842 621 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 UBBP0CG47 229 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 MGMTP16455 207 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 SRD5A1P18405 259 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 MYL9P24844 172 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 QRFPP83859 136 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 TAF9Q16594 264 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
FDPS-213ENST00000489003 C11orf42Q8N5U0 333 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms