RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SFTPDP35247 375 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 RRADP55042 308 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 TMEM176BQ3YBM2 270 aaPredicted RBP16.97■□□□□ 0.31
HMG20B-213ENST00000488973 PPP1R3BQ86XI6 285 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 LGI3Q8N145 548 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 LRRC18Q8N456 261 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 HSD17B11Q8NBQ5 300 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 NTNG2Q96CW9 530 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 MSI2Q96DH6 328 aaKnown RBP16.97■□□□□ 0.31
HMG20B-213ENST00000488973 SIRT7Q9NRC8 400 aa16.97■□□□□ 0.31
HMG20B-213ENST00000488973 CSNK1A1P48729 337 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 SOHLH1Q5JUK2 328 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 FAM69BQ5VUD6 431 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 FOXL2NBQ6ZUU3 175 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 OR52M1Q8NGK5 317 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 SYT3Q9BQG1 590 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 SLC2A9Q9NRM0 540 aa16.96■□□□□ 0.31
HMG20B-213ENST00000488973 NXT1Q9UKK6 140 aaKnown RBP16.96■□□□□ 0.31
HMG20B-213ENST00000488973 OR2C1O95371 312 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 OR13C7P0DN81 318 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 KLK2P20151 261 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 MTCP1P56278 107 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 RPS23P62266 143 aaKnown RBP16.96■□□□□ 0.3
HMG20B-213ENST00000488973 GAGE1Q13065 139 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 HEPN1Q6WQI6 88 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 SPSB1Q96BD6 273 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 GOLT1BQ9Y3E0 138 aa16.96■□□□□ 0.3
HMG20B-213ENST00000488973 EML6Q6ZMW3 1958 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 M0R135 149 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 OPRM1P35372 400 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 PPP1CCP36873 323 aaKnown RBP16.95■□□□□ 0.3
HMG20B-213ENST00000488973 TAF9Q16594 264 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 TSTD1Q8NFU3 115 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 TMEM54Q969K7 222 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF799Q96GE5 643 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 NDUFAF3Q9BU61 184 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 ASCL3Q9NQ33 180 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 MYOTQ9UBF9 498 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 RCL1Q9Y2P8 373 aaKnown RBP16.95■□□□□ 0.3
HMG20B-213ENST00000488973 YIF1AO95070 293 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 TMEM182Q6ZP80 229 aaPredicted RBP16.95■□□□□ 0.3
HMG20B-213ENST00000488973 RABEPKQ7Z6M1 372 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 SUMF2Q8NBJ7 301 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 FAM213BQ8TBF2 198 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 NABP1Q96AH0 204 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
HMG20B-213ENST00000488973 ZFAND5O76080 213 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 UCP3P55916 312 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 FXYD4P59646 89 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 PHLDA2Q53GA4 152 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 TSPO2Q5TGU0 170 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 OR8G5Q8NG78 346 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 NOL4LQ96MY1 436 aaPredicted RBP16.94■□□□□ 0.3
HMG20B-213ENST00000488973 GPR173Q9NS66 373 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 VCANP13611 3396 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 PIAS2O75928 621 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
HMG20B-213ENST00000488973 NXPH1P58417 271 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 GNMTQ14749 295 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 PHYHD1Q5SRE7 291 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 OR4D5Q8NGN0 318 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 SPTSSAQ969W0 71 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 BOD1Q96IK1 185 aa16.94■□□□□ 0.3
HMG20B-213ENST00000488973 MED12Q93074 2177 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 OR2J2O76002 312 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 F10P00742 488 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 EWSR1Q01844 656 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMG20B-213ENST00000488973 HIKESHIQ53FT3 197 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 FADS6Q8N9I5 356 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 OR5L1Q8NGL2 311 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 PUS1Q9Y606 427 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMG20B-213ENST00000488973 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
HMG20B-213ENST00000488973 CCDC187A0A096LP49 1063 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 A8MWP6 167 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 SEC14L6B5MCN3 397 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 ANGPTL7O43827 346 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 GLB1P16278 677 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 H3F3AP84243 136 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF266Q14584 549 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 NKAIN1Q4KMZ8 207 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 WDR74Q6RFH5 385 aaPredicted RBP16.92■□□□□ 0.3
HMG20B-213ENST00000488973 CCDC71LQ8N9Z2 235 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 MOB3AQ96BX8 217 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 REEP6Q96HR9 211 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 PRO1933Q9H354 126 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 TMEM11P17152 192 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 SHBQ15464 509 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 ASCL4Q6XD76 172 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 OR5R1Q8NH85 324 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 MUCL1Q96DR8 90 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 RARRES2Q99969 163 aa16.92■□□□□ 0.3
HMG20B-213ENST00000488973 RBFOX3A6NFN3 312 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 PRSS47A8MTI9 375 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 DLEU1O43261 78 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 SPRY1O43609 319 aaPredicted RBP16.91■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF205O95201 554 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 DBHP09172 617 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 SNAI3Q3KNW1 292 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 SLC22A25Q6T423 547 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 OR10D4PQ8NGN7 298 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms