RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 KCNK7Q9Y2U2 307 aa9.27□□□□□ -0.92
COL21A1-211ENST00000488912 PLSCR5A0PG75 271 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 C3orf80F5H4A9 247 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 TRAPPC2LH3BP13 241 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 CDIPTO14735 213 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 GEMIN2O14893 280 aaKnown RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 OR4A8P0C604 315 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 HIST1H1DP16402 221 aaKnown RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 RBM11P57052 281 aaKnown RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 BTN1A1Q13410 526 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 DAZAP2Q15038 168 aaPredicted RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 ELP2Q6IA86 826 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 TOMM5Q8N4H5 51 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 Q8NFD4 153 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 NEUROG1Q92886 237 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 MRPS24Q96EL2 167 aaKnown RBP9.27□□□□□ -0.93
COL21A1-211ENST00000488912 IL36RNQ9UBH0 155 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 ST3GAL6Q9Y274 331 aa9.27□□□□□ -0.93
COL21A1-211ENST00000488912 MFNGO00587 321 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 CD3EP07766 207 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 SNU13P55769 128 aaKnown RBP9.26□□□□□ -0.93
COL21A1-211ENST00000488912 SELENOVP59797 346 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 NKPD1Q17RQ9 610 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 HACD4Q5VWC8 232 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 PRAMEF6Q5VXH4 476 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 GPX8Q8TED1 209 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 NUDCD2Q8WVJ2 157 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 SEH1LQ96EE3 360 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 ELMOD3Q96FG2 381 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 PCDHB16Q9NRJ7 776 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 FLNCQ14315 2725 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 KMT2BQ9UMN6 2715 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-211ENST00000488912 DEFB108AA8MXU0 73 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 E7EQL1 145 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 H7C417 338 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 LYRM1O43325 122 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 PLAUP00749 431 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 FCER2P06734 321 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 LPLP06858 475 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 MELTFP08582 738 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 BTF3P20290 206 aaKnown RBP9.26□□□□□ -0.93
COL21A1-211ENST00000488912 FGF12P61328 243 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 KLF9Q13886 244 aaPredicted RBP9.26□□□□□ -0.93
COL21A1-211ENST00000488912 PDCD1Q15116 288 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 MPPED2Q15777 294 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 BEX5Q5H9J7 111 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 ZNF826PQ6ZT77 177 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 C6orf201Q7Z4U5 140 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 C11orf53Q8IXP5 236 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 PLK3Q9H4B4 646 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 NLKQ9UBE8 527 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 MTFP1Q9UDX5 166 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 POLDIP2Q9Y2S7 368 aa9.26□□□□□ -0.93
COL21A1-211ENST00000488912 ARFGEF3Q5TH69 2177 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 A6NLC8 198 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 SPRY3O43610 288 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 IFNA7P01567 189 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 GSTP1P09211 210 aaKnown RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 SPRNQ5BIV9 151 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 FIP1L1Q6UN15 594 aaKnown RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 OVCH2Q7RTZ1 564 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 PECRQ9BY49 303 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 TLNRD1Q9H1K6 362 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 UFSP2Q9NUQ7 469 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 MED9Q9NWA0 146 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 RNF115Q9Y4L5 304 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 SULT1C2O00338 296 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 FABP7O15540 132 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 SSX5O60225 188 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 RBBP9O75884 186 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 LOXP28300 417 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 RBMXP38159 391 aaKnown RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 CD200P41217 278 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 ZNF81P51508 661 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 HOXA4Q00056 320 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 PCGF3Q3KNV8 242 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 TRAPPC6BQ86SZ2 158 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 OR2V2Q96R30 315 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 NRIP2Q9BQI9 281 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 REG4Q9BYZ8 158 aa9.25□□□□□ -0.93
COL21A1-211ENST00000488912 RANBP3Q9H6Z4 567 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-211ENST00000488912 USP9XQ93008 2570 aaPredicted RBP9.24□□□□□ -0.93
COL21A1-211ENST00000488912 HRNRQ86YZ3 2850 aaPredicted RBP9.24□□□□□ -0.93
COL21A1-211ENST00000488912 ANKRD20A5PA0PJZ0 165 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 C19orf84I3L1E1 186 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 OR7C1O76099 320 aaPredicted RBP9.24□□□□□ -0.93
COL21A1-211ENST00000488912 CHATP28329 748 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 DUSP1P28562 367 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 SERPINF1P36955 418 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 GMFBP60983 142 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 ERVK11-1P61568 191 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 MZT1Q08AG7 82 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 NHLRC3Q5JS37 347 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 MZT2BQ6NZ67 158 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 WDR82Q6UXN9 313 aa9.24□□□□□ -0.93
COL21A1-211ENST00000488912 FAM58AQ8N1B3 248 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms