RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 Q6P435 159 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 PRSS57Q6UWY2 283 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 DNM1P46Q6ZS02 220 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 Q8NFD4 153 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 OR8B3Q8NGG8 313 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 CLDND2Q8NHS1 167 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 NEK7Q8TDX7 302 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 PHF21AQ96BD5 680 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 SLC25A38Q96DW6 304 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 OR8B2Q96RD0 313 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 TM2D1Q9BX74 207 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 CHST6Q9GZX3 395 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 PPA2Q9H2U2 334 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 AKAP9Q99996 3911 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 VPS13CQ709C8 3753 aa10.27□□□□□ -0.76
TRAIP-209ENST00000488860 A0A075B6Q4 140 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 METTL21EPA6NDL7 271 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 SIGLEC5O15389 551 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 SOCS1O15524 211 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 NDUFA2O43678 99 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 EIF4EP06730 217 aaKnown RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 CHRM2P08172 466 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 AMY2BP19961 511 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 BLVRBP30043 206 aaPredicted RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 PITPNBP48739 271 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 IL13RA1P78552 427 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 DYNC1I2Q13409 638 aaKnown RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 MADCAM1Q13477 382 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ATXN7L3Q14CW9 347 aaPredicted RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 MOGAT2Q3SYC2 334 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 PAN3Q58A45 887 aaKnown RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ZNF788Q6ZQV5 615 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 NLRC3Q7RTR2 1065 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 BIVMQ86UB2 503 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 LAX1Q8IWV1 398 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 FGFRL1Q8N441 504 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ZNF561Q8N587 486 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 DTX3Q8N9I9 347 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 CHST4Q8NCG5 386 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ZNRF1Q8ND25 227 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ST8SIA4Q92187 359 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 PTX4Q96A99 478 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
TRAIP-209ENST00000488860 NEDD4LQ96PU5 975 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 ING3Q9NXR8 418 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 MIOXQ9UGB7 285 aa10.27□□□□□ -0.77
TRAIP-209ENST00000488860 YLPM1P49750 1951 aaKnown RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 CSMD1Q96PZ7 3565 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 TMEM82A0PJX8 343 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A10PA6NDY2 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A7PA6NKC0 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A22PA8MWA6 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A23PA8MXZ1 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 NDUFB3O43676 98 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 PDCD6O75340 191 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FSTL3O95633 263 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 NDUFB7P17568 137 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 SEC61A1P61619 476 aaKnown RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 EDDM3AQ14507 147 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 FAM189A2Q15884 450 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 RAB12Q6IQ22 244 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 IZUMO1Q8IYV9 350 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 BPIFB2Q8N4F0 458 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 SUMF2Q8NBJ7 301 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 H1FXQ92522 213 aaKnown RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 SDSLQ96GA7 329 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 MED30Q96HR3 178 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 CYYR1Q96J86 154 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 DPCDQ9BVM2 203 aaPredicted RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 DNTTIP1Q9H147 329 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 PATZ1Q9HBE1 687 aaKnown RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 SLC25A10Q9UBX3 287 aaPredicted RBP10.26□□□□□ -0.77
TRAIP-209ENST00000488860 ADAM30Q9UKF2 790 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 MAB21L2Q9Y586 359 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 PEX16Q9Y5Y5 336 aa10.26□□□□□ -0.77
TRAIP-209ENST00000488860 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms