RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 FBXO7Q9Y3I1 522 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 A0A1B0GTI1 187 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 C5orf63A6NC05 138 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 LEUTXA8MZ59 168 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 C9orf172C9J069 976 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 SIGLEC5O15389 551 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 ATG12O94817 140 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 ZFP36L1Q07352 338 aaKnown RBP11.51□□□□□ -0.57
HMGN1-216ENST00000486741 OR2G3Q8NGZ4 309 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 MRPL24Q96A35 216 aaKnown RBP11.51□□□□□ -0.57
HMGN1-216ENST00000486741 TREM2Q9NZC2 230 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 CRHP06850 196 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 TNFSF4P23510 183 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
HMGN1-216ENST00000486741 ERVK-16P61578 105 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 PPP1CBP62140 327 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 C21orf62-AS1Q17RA5 79 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 OR2J1Q9GZK6 312 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
HMGN1-216ENST00000486741 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 AADACP22760 399 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 NUFIP2Q7Z417 695 aaKnown RBP11.5□□□□□ -0.57
HMGN1-216ENST00000486741 SVBPQ8N300 66 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 PLEKHF2Q9H8W4 249 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 PCDHB10Q9UN67 800 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 DOCK10Q96BY6 2186 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 GPR137BO60478 399 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 ACKR3P25106 362 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 SRPXP78539 464 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 MITD1Q8WV92 249 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 PINLYPA6NC86 204 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 DNPH1O43598 174 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 ACP1P24666 158 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 NPBWR2P48146 333 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 FLI1Q01543 452 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-216ENST00000486741 CATR1Q13166 79 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 PLAC9Q5JTB6 97 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
HMGN1-216ENST00000486741 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 AQP3Q92482 292 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 PRRX2Q99811 253 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 SLC25A32Q9H2D1 315 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF391Q9UJN7 358 aa11.5□□□□□ -0.57
HMGN1-216ENST00000486741 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
HMGN1-216ENST00000486741 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 KRASP01116 189 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 MPPED2Q15777 294 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 LAMTOR1Q6IAA8 161 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 NDUFB7P17568 137 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 ELLP55199 621 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 H1FXQ92522 213 aaKnown RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 RAB18Q9NP72 206 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 FIGNL2A6NMB9 653 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 CTXN2P0C2S0 81 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 AKR1C3P42330 323 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 PTX4Q96A99 478 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 TRAF4Q9BUZ4 470 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 DDA1Q9BW61 102 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 NPDC1Q9NQX5 325 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-216ENST00000486741 NPIPB13A6NJU9 1138 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 NPIPB4C9JG80 1138 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 PRRG2O14669 202 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 IFNA4P05014 189 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 MPGP29372 298 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 PTGER4P35408 488 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 PTGDSP41222 190 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 BATFQ16520 125 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 HOGA1Q86XE5 327 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 OR1S2Q8NGQ3 325 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 GPR137Q96N19 417 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 PIGMQ9H3S5 423 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
HMGN1-216ENST00000486741 LOC102723996A0A087X1L8 192 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 DHRS7CA6NNS2 312 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 E5RGE8 158 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 NTN3O00634 580 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-216ENST00000486741 SPINT2O43291 252 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 JTBO76095 146 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 CYC1P08574 325 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
HMGN1-216ENST00000486741 NSG2Q9Y328 171 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms