RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
UPF3A-208ENST00000484246 C19orf12Q9NSK7 152 aa13.07□□□□□ -0.32
UPF3A-208ENST00000484246 A0A1W2PPH5 198 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 SH2D1BO14796 132 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 TCF21O43680 179 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 PSPNO60542 156 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 OR2H2O95918 312 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 RBP4P02753 201 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 HSMCR30P0CW71 290 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 CD37P11049 281 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ERP29P30040 261 aaKnown RBP13.06□□□□□ -0.32
UPF3A-208ENST00000484246 OR3A1P47881 315 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ARF6P62330 175 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 MEF2CQ06413 473 aaPredicted RBP13.06□□□□□ -0.32
UPF3A-208ENST00000484246 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 Q6P435 159 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ZNF773Q6PK81 442 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 TMEM91Q6ZNR0 172 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 SATL1Q86VE3 508 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 SPARTQ8N0X7 666 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 Q8N7P7 452 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
UPF3A-208ENST00000484246 PCGF1Q9BSM1 259 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 FAM192AQ9GZU8 254 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 IFT22Q9H7X7 185 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 METTL8Q9H825 291 aaKnown RBP13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 ZNF69Q9UC07 566 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 GSTK1Q9Y2Q3 226 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 LRRC42Q9Y546 428 aa13.06□□□□□ -0.32
UPF3A-208ENST00000484246 A0A1W2PPK0 400 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 MGST3O14880 152 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 INMTO95050 263 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 PRTN3P24158 256 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 DUSP1P28562 367 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 HILS1P60008 231 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 RPS25P62851 125 aaKnown RBP13.05□□□□□ -0.32
UPF3A-208ENST00000484246 PAX5Q02548 391 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 BLMHQ13867 455 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 INSL4Q14641 139 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 RSU1Q15404 277 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 LINC00596Q86U02 117 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 LRRTM1Q86UE6 522 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 BPIFB2Q8N4F0 458 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 TNFRSF14Q92956 283 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 MRPS24Q96EL2 167 aaKnown RBP13.05□□□□□ -0.32
UPF3A-208ENST00000484246 C1orf147Q96MC9 270 aaPredicted RBP13.05□□□□□ -0.32
UPF3A-208ENST00000484246 SLC6A7Q99884 636 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 METTL9Q9H1A3 318 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 PRDM13Q9H4Q3 707 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 PCDHB16Q9NRJ7 776 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 NDUFB11Q9NX14 153 aa13.05□□□□□ -0.32
UPF3A-208ENST00000484246 ARHGAP32A7KAX9 2087 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 CENPVL3A0A0U1RRI6 287 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 ARL6IP5O75915 188 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GALP22466 123 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 DLX6P56179 175 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GUCA2AQ02747 115 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GPR176Q14439 515 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GRK1Q15835 563 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 SSX1Q16384 188 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 HSD17B12Q53GQ0 312 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 FAM27D1Q5T7N8 215 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 NCR3LG1Q68D85 454 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 TMEM200BQ69YZ2 307 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GDPD3Q7L5L3 318 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 TCF23Q7RTU1 214 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 VMO1Q7Z5L0 202 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 CEACAM19Q7Z692 300 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 C11orf42Q8N5U0 333 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 FOXRED1Q96CU9 486 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-208ENST00000484246 JMJD8Q96S16 334 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
UPF3A-208ENST00000484246 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 GHRLQ9UBU3 117 aa13.04□□□□□ -0.32
UPF3A-208ENST00000484246 IGHV1-69DA0A0B4J2H0 117 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 A0A0G2JK05 382 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 SLC33A1O00400 549 aaPredicted RBP13.03□□□□□ -0.32
UPF3A-208ENST00000484246 CDRT1O95170 752 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 IGHV1-69P01742 117 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 MAS1P04201 325 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 CALCBP10092 127 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 GABRR1P24046 479 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 KCNJ3P48549 501 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 P2RX3P56373 397 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 RBM11P57052 281 aaKnown RBP13.03□□□□□ -0.32
UPF3A-208ENST00000484246 ZNF273Q14593 569 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 MPV17LQ2QL34 196 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 OSR2Q8N2R0 312 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 JAGN1Q8N5M9 183 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 OR4D6Q8NGJ1 314 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 MUL1Q969V5 352 aa13.03□□□□□ -0.32
UPF3A-208ENST00000484246 NKX3-1Q99801 234 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms