RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 AK3Q9UIJ7 227 aa22.33■■□□□ 1.17
SHOX2-204ENST00000483851 PRR14LQ5THK1 2151 aa22.33■■□□□ 1.16
SHOX2-204ENST00000483851 OR7C1O76099 320 aaPredicted RBP22.32■■□□□ 1.16
SHOX2-204ENST00000483851 MPC2O95563 127 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 IGHV3-13P01766 116 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 GLAP06280 429 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 AMY2BP19961 511 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 CD40P25942 277 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF81P51508 661 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 SNU13P55769 128 aaKnown RBP22.32■■□□□ 1.16
SHOX2-204ENST00000483851 DAZAP2Q15038 168 aaPredicted RBP22.32■■□□□ 1.16
SHOX2-204ENST00000483851 MICBQ29980 383 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 WDR86Q86TI4 376 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 FAM58AQ8N1B3 248 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 OPN4Q9UHM6 478 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 MLNRO43193 412 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 OR4E1P0C645 316 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 TSPAN5P62079 268 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF154Q13106 437 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 OR5H2Q8NGV7 314 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 ST6GALNAC5Q9BVH7 336 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 IFT22Q9H7X7 185 aa22.32■■□□□ 1.16
SHOX2-204ENST00000483851 F8VVB4 439 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 F8VWA3 439 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 ZDHHC22Q8N966 263 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 NUP37Q8NFH4 326 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 OR5AP2Q8NGF4 316 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 MRGPRFQ96AM1 343 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 TLNRD1Q9H1K6 362 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 SHANK1Q9Y566 2161 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 ESPL1Q14674 2120 aa22.31■■□□□ 1.16
SHOX2-204ENST00000483851 MED19A0JLT2 244 aaPredicted RBP22.3■■□□□ 1.16
SHOX2-204ENST00000483851 NOS1APO75052 506 aaPredicted RBP22.3■■□□□ 1.16
SHOX2-204ENST00000483851 SNAPC5O75971 98 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 SSTR2P30874 369 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 ASCL1P50553 236 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 ERVK11-1P61568 191 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 TMEM17Q86X19 198 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 IGLV3-9A0A075B6K5 115 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 SLC22A5O76082 557 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 PGA5P0DJD9 388 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 PRKACAP17612 351 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 OR3A3P47888 321 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 NKPD1Q17RQ9 610 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 FBXL19-AS1Q494R0 122 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 SCGB2B2Q4G0G5 96 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 C4orf46Q504U0 113 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 ALKBH2Q6NS38 261 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 C22orf34Q6ZV56 151 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 ASB13Q8WXK3 278 aa22.3■■□□□ 1.16
SHOX2-204ENST00000483851 GTF3AQ92664 365 aaKnown RBP22.3■■□□□ 1.16
SHOX2-204ENST00000483851 POLEQ07864 2286 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 RGS11O94810 467 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 PMP2P02689 132 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 KLF3P57682 345 aaPredicted RBP22.29■■□□□ 1.16
SHOX2-204ENST00000483851 UBE2MP61081 183 aaKnown RBP22.29■■□□□ 1.16
SHOX2-204ENST00000483851 Q6ZR03 302 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 TMEM171Q8WVE6 324 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 NRIP2Q9BQI9 281 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF442Q9H7R0 627 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 NGBQ9NPG2 151 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 C12orf4Q9NQ89 552 aa22.29■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF701Q9NV72 531 aaPredicted RBP22.29■■□□□ 1.16
SHOX2-204ENST00000483851 H0YL77 283 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 RHBDL1O75783 438 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 SIX6O95475 246 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 CXCL2P19875 107 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 GRK1Q15835 563 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 SRSF7Q16629 238 aaKnown RBP eCLIP22.28■■□□□ 1.16
SHOX2-204ENST00000483851 CHRFAM7AQ494W8 412 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF581Q9P0T4 197 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 VSIG4Q9Y279 399 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 SPTA1P02549 2419 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 FCGR3AP08637 254 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 CHRNB4P30926 498 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 SELENOVP59797 346 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 DCAF12L2Q5VW00 463 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 OVCH2Q7RTZ1 564 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 TERB2Q8NHR7 220 aa22.28■■□□□ 1.16
SHOX2-204ENST00000483851 DPCDQ9BVM2 203 aaPredicted RBP22.28■■□□□ 1.16
SHOX2-204ENST00000483851 ZNF230Q9UIE0 474 aaPredicted RBP22.28■■□□□ 1.16
SHOX2-204ENST00000483851 CHD8Q9HCK8 2581 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 CEACAM18A8MTB9 384 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 HMSDA8MTL9 139 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 MCRIP1C9JLW8 97 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 ATP6V1G2-DDX39BF2Z307 99 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 F5H5P2 479 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 CCL21O00585 134 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 GOSR2O14653 212 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 CSN2P05814 226 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 ANXA10Q9UJ72 324 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 FZR1Q9UM11 496 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 OSGIN2Q9Y236 505 aa22.27■■□□□ 1.16
SHOX2-204ENST00000483851 POM121CA8CG34 1229 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 CDIPTO14735 213 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 PTBP3O95758 552 aaKnown RBP22.26■■□□□ 1.15
SHOX2-204ENST00000483851 Q6ZS49 121 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 C12orf45Q8N5I9 185 aaPredicted RBP22.26■■□□□ 1.15
SHOX2-204ENST00000483851 POC1AQ8NBT0 407 aa22.26■■□□□ 1.15
SHOX2-204ENST00000483851 CYYR1Q96J86 154 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms