RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 LGALS4P56470 323 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 KISS1Q15726 138 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 OR2G6Q5TZ20 316 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 HCP5Q6MZN7 132 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 C17orf107Q6ZR85 190 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 OR52N1Q8NH53 320 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.6
VARS-225ENST00000482996 EXOSC4Q9NPD3 245 aaKnown RBP11.33□□□□□ -0.6
VARS-225ENST00000482996 BABAM2Q9NXR7 383 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 C1RLQ9NZP8 487 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 GSTK1Q9Y2Q3 226 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 MGAM2Q2M2H8 2515 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 IGKV1-12A0A0C4DH73 117 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 FUOMA2VDF0 154 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 MGST3O14880 152 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 IGKV1D-12P01611 117 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 RBP4P02753 201 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 BMXP51813 675 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 DLX6P56179 175 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 TAF9Q16594 264 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 XAF1Q6GPH4 301 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
VARS-225ENST00000482996 C11orf42Q8N5U0 333 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 BEND2Q8NDZ0 799 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 OR13D1Q8NGV5 346 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 RPS4Y2Q8TD47 263 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 GGHQ92820 318 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 SMIM19Q96E16 107 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 ZNF714Q96N38 554 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 GPER1Q99527 375 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 CNOT2Q9NZN8 540 aaKnown RBP11.32□□□□□ -0.6
VARS-225ENST00000482996 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 ZNF281Q9Y2X9 895 aa11.32□□□□□ -0.6
VARS-225ENST00000482996 SIRPB1O00241 398 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 OGG1O15527 345 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 PSPNO60542 156 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 OR2H2O95918 312 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 GNAO1P09471 354 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 ZNF44P15621 663 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
VARS-225ENST00000482996 PPP3R1P63098 170 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
VARS-225ENST00000482996 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 SATL1Q86VE3 508 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 OR52N4Q8NGI2 321 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 RGP1Q92546 391 aaPredicted RBP11.31□□□□□ -0.6
VARS-225ENST00000482996 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 NR1H4Q96RI1 486 aaPredicted RBP11.31□□□□□ -0.6
VARS-225ENST00000482996 SLITRK2Q9H156 845 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 TAS2R4Q9NYW5 299 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
VARS-225ENST00000482996 MEX3AA1L020 520 aaKnown RBP11.3□□□□□ -0.6
VARS-225ENST00000482996 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 OR3A1P47881 315 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 MTNR1BP49286 362 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 P2RX3P56373 397 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 TAS2R43P59537 309 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 ZP1P60852 638 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 RELBQ01201 579 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 SCN1BQ07699 218 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 OLFML2AQ68BL7 652 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 ZNF529Q6P280 563 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 PXT1Q8NFP0 134 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 TNFAIP8L1Q8WVP5 186 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 SSX3Q99909 188 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 PLCXD1Q9NUJ7 323 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 SCN3BQ9NY72 215 aa11.3□□□□□ -0.6
VARS-225ENST00000482996 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
VARS-225ENST00000482996 H3BUX3 64 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 MYL12BO14950 172 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 DEGS1O15121 323 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 LALBAP00709 142 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 ALDOBP05062 364 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 ARG1P05089 322 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 LMO1P25800 156 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 TGFBR2P37173 567 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 RSU1Q15404 277 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 AANATQ16613 207 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 DMKNQ6E0U4 476 aaPredicted RBP11.29□□□□□ -0.6
VARS-225ENST00000482996 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 BPIFB6Q8NFQ5 453 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 OR51A2Q8NGJ7 313 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 FBLIM1Q8WUP2 373 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 C17orf50Q8WW18 174 aa11.29□□□□□ -0.6
VARS-225ENST00000482996 GHSRQ92847 366 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms