RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CAPZA1P52907 286 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 NCR3LG1Q68D85 454 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF367Q7RTV3 350 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 LINC00596Q86U02 117 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 SVOPQ8N4V2 548 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 Q8N7P7 452 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 OR5D18Q8NGL1 313 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 TNFAIP8L1Q8WVP5 186 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 FOXRED1Q96CU9 486 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-217ENST00000479161 PCGF1Q9BSM1 259 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 CCDC90BQ9GZT6 254 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 MS4A7Q9GZW8 240 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-217ENST00000479161 OCEL1Q9H607 264 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
C9orf3-217ENST00000479161 EXOSC4Q9NPD3 245 aaKnown RBP12.72□□□□□ -0.37
C9orf3-217ENST00000479161 ACOT13Q9NPJ3 140 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 GHRLQ9UBU3 117 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF69Q9UC07 566 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 KIAA2026Q5HYC2 2103 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 PNMA8CA0A1B0GUJ8 204 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 A0A1W2PQ09 198 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 TMEM82A0PJX8 343 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 FUOMA2VDF0 154 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 INMTO95050 263 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 TFF1P04155 84 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 UCHL1P09936 223 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 GALP22466 123 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 KCNJ3P48549 501 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 CEBPDP49716 269 aaPredicted RBP12.71□□□□□ -0.37
C9orf3-217ENST00000479161 RSU1Q15404 277 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 TMEM200BQ69YZ2 307 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 Q6P435 159 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 SATL1Q86VE3 508 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 PHC2Q8IXK0 858 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.37
C9orf3-217ENST00000479161 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 METTL9Q9H1A3 318 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 NOX4Q9NPH5 578 aa12.71□□□□□ -0.37
C9orf3-217ENST00000479161 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.37
C9orf3-217ENST00000479161 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 A0A0G2JK05 382 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 CLDN34H7C241 214 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 PSPNO60542 156 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 OR2H2O95918 312 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 GABRA5P31644 462 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 RANBP1P43487 201 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 UBE2E1P51965 193 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 EMX1Q04741 257 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-217ENST00000479161 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 RBMS3Q6XE24 437 aaKnown RBP12.7□□□□□ -0.38
C9orf3-217ENST00000479161 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 FCGR1BQ92637 280 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 S100A13Q99584 98 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 C19orf12Q9NSK7 152 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
C9orf3-217ENST00000479161 hADV38S2A0JD32 116 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 H3BUI4 141 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 ARL6IP5O75915 188 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 SRMP19623 302 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 OR3A1P47881 315 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 OR3A4PP47883 348 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 GP2P55259 537 aaKnown RBP12.69□□□□□ -0.38
C9orf3-217ENST00000479161 DLX6P56179 175 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 MPV17LQ2QL34 196 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 UBE2UQ5VVX9 321 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 CD200R1LQ6Q8B3 271 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 BATF2Q8N1L9 274 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 CORO2AQ92828 525 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 TMED9Q9BVK6 235 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 TCF7L1Q9HCS4 588 aa12.69□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 SLC33A1O00400 549 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-217ENST00000479161 DEGS1O15121 323 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 CSTBP04080 98 aaKnown RBP12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 UBBP0CG47 229 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 HSMCR30P0CW71 290 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 ZNF728P0DKX0 622 aa12.68□□□□□ -0.38
C9orf3-217ENST00000479161 GTF2F2P13984 249 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms