RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	MYL6	P60660	151 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	PPP1CA	P62136	330 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	RPL10A	P62906	217 aa	Known RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	MRPS15	P82914	257 aa	Known RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	MED21	Q13503	144 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	EXOC3L4	Q17RC7	722 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CEACAM21	Q3KPI0	293 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	ACTBL2	Q562R1	376 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	YIF1B	Q5BJH7	314 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	NIPAL1	Q6NVV3	410 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	GUSBP11	Q6P575	273 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC13A5	Q86YT5	568 aa	Predicted RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CYP4Z2P	Q8N1L4	340 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	GAPT	Q8N292	157 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	DRAM1	Q8N682	238 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	LFNG	Q8NES3	379 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	ACTL9	Q8TC94	416 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	SMARCD1	Q96GM5	515 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	PGLYRP3	Q96LB9	341 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	CDX2	Q99626	313 aa	Predicted RBP	2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	TAPBPL	Q9BX59	468 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	SAMD10	Q9BYL1	202 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	LHX5	Q9H2C1	402 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	RHOF	Q9HBH0	211 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	RBM22	Q9NW64	420 aa	Known RBP eCLIP	2.2	□□□□□ -2.06	2e-13	■■■■■ 31.6
RBM39-231	ENST00000477334	DDIT4	Q9NX09	232 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	TAS2R13	Q9NYV9	303 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	NAGK	Q9UJ70	344 aa		2.2	□□□□□ -2.06
RBM39-231	ENST00000477334	IGKV1-27	A0A075B6S5	117 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334		A0A0G2JMP0	313 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	IGHV7-4-1	A0A0J9YVY3	117 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334		A0A0X1KG70	313 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	OR5H1	A6NKK0	313 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	OR2AT4	A6NND4	320 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	EFCAB9	A8MZ26	197 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	ZW10	O43264	779 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	MPZL2	O60487	215 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	ADAP1	O75689	374 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	DEXI	O95424	95 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	RNASE2	P10153	161 aa	Known RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	PRSS3	P35030	304 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	CBX5	P45973	191 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC18A1	P54219	525 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	EMP2	P54851	167 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	DLX6	P56179	175 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	OR10A3	P58181	314 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	MAGOH	P61326	146 aa	Known RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	FBXL19-AS1	Q494R0	122 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	OGFRL1	Q5TC84	451 aa	Predicted RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	CLEC19A	Q6UXS0	136 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	PAGE2	Q7Z2X7	111 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	MIR7-3HG	Q8N6C7	128 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF645	Q8N7E2	425 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	UBA3	Q8TBC4	463 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	ENKUR	Q8TC29	256 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	FAM45A	Q8TCE6	357 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	HGD	Q93099	445 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	S100PBP	Q96BU1	408 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	PPP1R14B	Q96C90	147 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	DDIT4L	Q96D03	193 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	CMTM5	Q96DZ9	223 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	HBEGF	Q99075	208 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	TBL1XR1	Q9BZK7	514 aa		2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	NSRP1	Q9H0G5	558 aa	Known RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	FARSA	Q9Y285	508 aa	Known RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	POLR3H	Q9Y535	204 aa	Predicted RBP	2.19	□□□□□ -2.06
RBM39-231	ENST00000477334	RBFOX3	A6NFN3	312 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	CENPBD1	B2RD01	187 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334		J3QLI3	93 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	PHYH	O14832	338 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC31A1	O15431	190 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	PLIN3	O60664	434 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	HPGDS	O60760	199 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	UGT2B11	O75310	529 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	DHRS3	O75911	302 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	IGKV1D-16	P01601	117 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	IGHV3-11	P01762	117 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	HLA-A	P01891	365 aa	Known RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	OR4Q2	P0C623	313 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF35	P13682	527 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	HLA-DMA	P28067	261 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	GCLM	P48507	274 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ACOT2	P49753	483 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	STC1	P52823	247 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	GRB2	P62993	217 aa	Known RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	HBG1	P69891	147 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	HBG2	P69892	147 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	BAX	Q07812	192 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	CEACAM16	Q2WEN9	425 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC25A35	Q3KQZ1	300 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	DNAL1	Q4LDG9	190 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	PDZD11	Q5EBL8	140 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	COQ5	Q5HYK3	327 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	TEX30	Q5JUR7	227 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	UBE2NL	Q5JXB2	153 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	KDM4D	Q6B0I6	523 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	LAMTOR1	Q6IAA8	161 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	FAM45BP	Q6NSW5	357 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	TTC33	Q6PID6	262 aa	Predicted RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	FAM183BP	Q6ZVS7	135 aa		2.18	□□□□□ -2.06

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