RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FLYWCH2Q96CP2 140 aaKnown RBP16.45■□□□□ 0.22
VARS2-209ENST00000477288 MPZL1O95297 269 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 APELAP0DMC3 54 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 RPS4XP62701 263 aaKnown RBP16.45■□□□□ 0.22
VARS2-209ENST00000477288 GGNBP1Q5YKI7 109 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 KCNMB2Q9Y691 235 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 CXorf51AA0A1B0GTR3 108 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 CCL4P13236 92 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 TEX261Q6UWH6 196 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 PTPMT1Q8WUK0 201 aaPredicted RBP16.45■□□□□ 0.22
VARS2-209ENST00000477288 LPAR2Q9HBW0 351 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 SLC6A1P30531 599 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 SCGB1D4Q6XE38 83 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 EIF4E3Q8N5X7 224 aaKnown RBP16.45■□□□□ 0.22
VARS2-209ENST00000477288 DYNLRB2Q8TF09 96 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 LINC00052Q96N35 136 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 NAA60Q9H7X0 242 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 ORM1P02763 201 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 ACP1P24666 158 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 C12orf73Q69YU5 71 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 MS4A10Q96PG2 267 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 PRO1933Q9H354 126 aa16.45■□□□□ 0.22
VARS2-209ENST00000477288 SKP2Q13309 424 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 OR10C1Q96KK4 312 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 SAP30LQ9HAJ7 183 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 M0R2Z0 102 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 GNG7O60262 68 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 RHBDL1O75783 438 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 TCL1AP56279 114 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 C11orf91Q3C1V1 193 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 GLRX2Q9NS18 164 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 SLC6A13Q9NSD5 602 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 MOGAT3Q86VF5 341 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 IL20Q9NYY1 176 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 C9orf170A2RU37 121 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 TCTEX1D1Q8N7M0 179 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 CLRN3Q8NCR9 226 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 SLC26A10Q8NG04 563 aa16.44■□□□□ 0.22
VARS2-209ENST00000477288 ZNF707Q96C28 371 aaPredicted RBP16.44■□□□□ 0.22
VARS2-209ENST00000477288 MRPS11P82912 194 aaKnown RBP16.44■□□□□ 0.22
VARS2-209ENST00000477288 EML2O95834 649 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 TMEM183BQ1AE95 376 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 LIAT1Q6ZQX7 453 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 PTPRZ1P23471 2315 aaPredicted RBP16.43■□□□□ 0.22
VARS2-209ENST00000477288 NDUFB6O95139 128 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 CDC20Q12834 499 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 DOLPP1Q86YN1 238 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 RHBDD2Q6NTF9 364 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 MRPL37Q9BZE1 423 aaKnown RBP16.43■□□□□ 0.22
VARS2-209ENST00000477288 CLDN34H7C241 214 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 PDCD6O75340 191 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 HOXC4P09017 264 aaPredicted RBP16.43■□□□□ 0.22
VARS2-209ENST00000477288 CT62P0C5K7 136 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 GZMKP49863 264 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 LYRM7Q5U5X0 104 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 FAM109BQ6ICB4 259 aaPredicted RBP16.43■□□□□ 0.22
VARS2-209ENST00000477288 RABAC1Q9UI14 185 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
VARS2-209ENST00000477288 CNTD2Q9H8S5 307 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 AKIP1Q9NQ31 210 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 MUC20Q8N307 709 aaPredicted RBP16.42■□□□□ 0.22
VARS2-209ENST00000477288 OR2Y1Q8NGV0 311 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 CYSLTR2Q9NS75 346 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 TMEM140Q9NV12 185 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 DYNLT3P51808 116 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 FAM60AQ9NP50 221 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 H3BVH4 76 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 CDKN2AP42771 156 aaKnown RBP16.42■□□□□ 0.22
VARS2-209ENST00000477288 FAM24BQ8N5W8 94 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 OR4S2Q8NH73 311 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 R3HDM4Q96D70 268 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 OR5B21A6NL26 309 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 CCL21O00585 134 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 C21orf58P58505 322 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 ST3GAL2Q16842 350 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 TMUB1Q9BVT8 246 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
VARS2-209ENST00000477288 KCNE1BA0A087WTH5 132 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 GSTZ1O43708 216 aaPredicted RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 TMEM127O75204 238 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 HSD17B13Q7Z5P4 300 aaPredicted RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 GABRG3Q99928 467 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 HERVK_113P61574 105 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 DHRS2Q13268 280 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 UQCC3Q6UW78 93 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 PRR13Q9NZ81 148 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 CTAG2O75638 210 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 CEBPDP49716 269 aaPredicted RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 RNFT1Q5M7Z0 435 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 CARFQ8N187 725 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 OR2C3Q8N628 320 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 GPX7Q96SL4 187 aaPredicted RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 LYRM2Q9NU23 88 aaPredicted RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 RPS4Y1P22090 263 aaKnown RBP16.41■□□□□ 0.22
VARS2-209ENST00000477288 CBLN3Q6UW01 205 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 ZNF547Q8IVP9 402 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms