RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RPL23AP62750 156 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 HSF1Q00613 529 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 MS4A18Q3C1V0 323 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 SLC25A45Q8N413 288 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 OR2AJ1Q8NGZ0 328 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 TMEM234Q8WY98 164 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 RTN4RQ9BZR6 473 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 SRD5A3Q9H8P0 318 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 PLEKHF2Q9H8W4 249 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 LAMA1P25391 3075 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 MMP9P14780 707 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 BAXQ07812 192 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 H1FNTQ75WM6 255 aaPredicted RBP13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 LYZL2Q7Z4W2 148 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 OR10A7Q8NGE5 316 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 GPR119Q8TDV5 335 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 ACY3Q96HD9 319 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 ANGPTL4Q9BY76 406 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 IGKV1D-43A0A0B4J1Z2 117 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 DHRS7CA6NNS2 312 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 GEMIN2O14893 280 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 CYTIPO60759 359 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 PGA4P0DJD7 388 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 PGA5P0DJD9 388 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 UCP3P55916 312 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 KISS1Q15726 138 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 RABEPKQ7Z6M1 372 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 OR52M1Q8NGK5 317 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 PTPMT1Q8WUK0 201 aaPredicted RBP13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 ADGRG7Q96K78 797 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 PTRH2Q9Y3E5 179 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-205ENST00000477264 TMEM225BP0DP42 221 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 PNLIPP16233 465 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 CASP6P55212 293 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 ZNF121P58317 390 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 TGIF2LYQ8IUE0 185 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 HAS2Q92819 552 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 FAM71F1Q96KD3 344 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 CISD1Q9NZ45 108 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 VAX2Q9UIW0 290 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 MCTS1Q9ULC4 181 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 V9GYS6 101 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 IGKV1D-8A0A087WSZ0 117 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 MED19A0JLT2 244 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 EREGO14944 169 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 TK1P04183 234 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 SNRPCP09234 159 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 METTL15P1P0C7V9 234 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 GLB1P16278 677 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 FUT3P21217 361 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 EPHA8P29322 1005 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 MTCP1P56278 107 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 POU3F1Q03052 451 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 THEM4Q5T1C6 240 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 ABLIM2Q6H8Q1 611 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 PRR22Q8IZ63 422 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 P2RX4Q99571 388 aa13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 LYRM2Q9NU23 88 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-205ENST00000477264 IGKV1-9A0A0C4DH69 117 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 A0A1W2PNV4 684 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 CDC14CA4D256 554 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 H0YIG0 161 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 IGKV3-11P04433 115 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 CCKARP32238 428 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 PLCXD2Q0VAA5 305 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 RAB35Q15286 201 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 SHBQ15464 509 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 HLA-BQ31612 363 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 PEAR1Q5VY43 1037 aaPredicted RBP13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 HLA-DQA1Q5Y7H0 255 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 H1FOOQ8IZA3 346 aaPredicted RBP13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 FAM185AQ8N0U4 392 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 PP6455Q8WZ26 134 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 ST8SIA1Q92185 356 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 OR8D2Q9GZM6 311 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 SLC2A9Q9NRM0 540 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 PLEKHJ1Q9NW61 149 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 LHFPL6Q9Y693 200 aa13.27□□□□□ -0.28
CLSTN1-205ENST00000477264 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 PPP5D1E7EU14 171 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 M0QZK8 103 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 M0R143 59 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 PRKNO60260 465 aaPredicted RBP13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 GGCTO75223 188 aaKnown RBP13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 CTSBP07858 339 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 ZNF17P17021 662 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 OR1D4P47884 311 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 PDLIM4P50479 330 aa13.27□□□□□ -0.29
CLSTN1-205ENST00000477264 TLE3Q04726 772 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms