RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 EML2O95834 649 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 VN1R4Q7Z5H5 301 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 NHSL1Q5SYE7 1610 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CACNA1DQ01668 2161 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CBY3A6NI87 242 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 RAB7AP51149 207 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
VAPB-204ENST00000475243 GGNBP1Q5YKI7 109 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 VAMP8Q9BV40 100 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 EXOGQ9Y2C4 368 aaKnown RBP9.7□□□□□ -0.86
VAPB-204ENST00000475243 AMMECR1Q9Y4X0 333 aaPredicted RBP9.7□□□□□ -0.86
VAPB-204ENST00000475243 A0A1W2PN81 502 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CRXO43186 299 aaPredicted RBP9.7□□□□□ -0.86
VAPB-204ENST00000475243 PNLIPP16233 465 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 FAM162BQ5T6X4 162 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 OR52L2PQ8NGH6 319 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 C19orf43Q9BQ61 176 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 COL19A1Q14993 1142 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CD226Q15762 336 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 SSX1Q16384 188 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 TBC1D26Q86UD7 250 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 COX14Q96I36 57 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 PCED1AQ9H1Q7 454 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 NAA60Q9H7X0 242 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 GEMIN2O14893 280 aaKnown RBP9.7□□□□□ -0.86
VAPB-204ENST00000475243 TGOLN2O43493 480 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 PDCD6O75340 191 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 SP1P08047 785 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CSF2RBP32927 897 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CD200P41217 278 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 LGALS7P47929 136 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
VAPB-204ENST00000475243 FOXL2P58012 376 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 GLI3P10071 1580 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CDIPTO14735 213 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 OR5AL1P0C617 328 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 POLR2GP62487 172 aaKnown RBP eCLIP9.69□□□□□ -0.86
VAPB-204ENST00000475243 RND1Q92730 232 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MMP24Q9Y5R2 645 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 ZNF716A6NP11 495 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SFT2D2O95562 160 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MOGAT3Q86VF5 341 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 OR6C3Q9NZP0 311 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MTFP1Q9UDX5 166 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 AHCTF1Q8WYP5 2266 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 HIKESHIQ53FT3 197 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 ZBTB37Q5TC79 503 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 XAF1Q6GPH4 301 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 TCTE3Q8IZS6 198 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 APOBEC4Q8WW27 367 aaKnown RBP9.69□□□□□ -0.86
VAPB-204ENST00000475243 RSRP1Q9BUV0 290 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MMP26Q9NRE1 261 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 GPR27Q9NS67 375 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SOCS1O15524 211 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 OR4A8P0C604 315 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MVDP53602 400 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 RAC3P60763 192 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 LILRB1Q8NHL6 650 aaPredicted RBP9.69□□□□□ -0.86
VAPB-204ENST00000475243 PECRQ9BY49 303 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SAP30LQ9HAJ7 183 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SPAARA0A1B0GVQ0 90 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 PTBP3O95758 552 aaKnown RBP9.69□□□□□ -0.86
VAPB-204ENST00000475243 HTR1DP28221 377 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 MDH2P40926 338 aaKnown RBP9.69□□□□□ -0.86
VAPB-204ENST00000475243 RAB1CQ92928 201 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 GTF2H5Q6ZYL4 71 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 TIPARPQ7Z3E1 657 aaKnown RBP9.69□□□□□ -0.86
VAPB-204ENST00000475243 ABCA7Q8IZY2 2146 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 UCN2Q96RP3 112 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 RAB40CQ96S21 281 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 THYN1Q9P016 225 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 TRAV38-1A0A0B4J264 116 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 ZNHIT1O43257 154 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 SKP2Q13309 424 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 RHBDD2Q6NTF9 364 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 WFDC3Q8IUB2 231 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 FLRT3Q9NZU0 649 aa9.69□□□□□ -0.86
VAPB-204ENST00000475243 ERVS71-1P61550 626 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 SEZ6L2Q6UXD5 910 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR8D4Q8NGM9 314 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR10G4Q8NGN3 311 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR10G9Q8NGN4 311 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 OR10G7Q8NGN6 311 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 NEIL1Q96FI4 390 aaPredicted RBP9.68□□□□□ -0.86
VAPB-204ENST00000475243 ABHD1Q96SE0 405 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 FRRS1LQ9P0K9 344 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 ADAP1O75689 374 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 ZNF141Q15928 474 aa9.68□□□□□ -0.86
VAPB-204ENST00000475243 MRM1Q6IN84 353 aaKnown RBP9.68□□□□□ -0.86
VAPB-204ENST00000475243 VWA1Q6PCB0 445 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms