RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SIRPB1O00241 398 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 NOS1APO75052 506 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 TSC22D2O75157 780 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 GSTT2P0CG29 244 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 DNASE1P24855 282 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SSTR2P30874 369 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 CBX5P45973 191 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 FXYD4P59646 89 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 LY6DQ14210 128 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SLC9A3R2Q15599 337 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 IGSF11Q5DX21 431 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TIMM23BQ5SRD1 257 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 C20orf204Q6ZNR8 217 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 OVCH2Q7RTZ1 564 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TMEM17Q86X19 198 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 WFDC8Q8IUA0 241 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 FAM58AQ8N1B3 248 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 C12orf45Q8N5I9 185 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 TOMM40LQ969M1 308 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TMEM230Q96A57 120 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 MUCL1Q96DR8 90 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 MRPS24Q96EL2 167 aaKnown RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 TMEM100Q9NV29 134 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 AMDHD2Q9Y303 409 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 NOP16Q9Y3C1 178 aaKnown RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 HIVEP3Q5T1R4 2406 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TRAV24A0A0B4J272 114 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 J3QT63 122 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SLC22A5O76082 557 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 KNG1P01042 644 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 ZNF44P15621 663 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TBPP20226 339 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 NFYAP23511 347 aaPredicted RBP5.29□□□□□ -1.56
CLK1-210ENST00000473565 ZBTB25P24278 435 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 GCH1P30793 250 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 ELP2Q6IA86 826 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SLC25A42Q86VD7 318 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TMEM200AQ86VY9 491 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SUMF2Q8NBJ7 301 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 OR8G5Q8NG78 346 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 MED30Q96HR3 178 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 SEC22AQ96IW7 307 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 OR14J1Q9UGF5 321 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 OSGIN2Q9Y236 505 aa5.29□□□□□ -1.56
CLK1-210ENST00000473565 TACC2O95359 2948 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 FAM25EA8MYX2 175 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 OR5H8P0DN80 308 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ID4P47928 161 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 TAS2R46P59540 309 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 IL13RA1P78552 427 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 IL24Q13007 206 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 CDK10Q15131 360 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZNF718Q3SXZ3 478 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 LY6G6FQ5SQ64 297 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 LHFPL1Q86WI0 220 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 C9orf62Q8N4C0 152 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ARRDC1Q8N5I2 433 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 Q8NFD4 153 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 OR2Z1Q8NG97 314 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 CCDC107Q8WV48 283 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 BOD1Q96IK1 185 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 RTBDNQ9BSG5 229 aaPredicted RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 BCL2L14Q9BZR8 327 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 C12orf4Q9NQ89 552 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 SLC23A1Q9UHI7 598 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 NPTNQ9Y639 398 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 SPTAN1Q13813 2472 aaKnown RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 hCG_1807616A0A1W2PRN6 198 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 C9orf170A2RU37 121 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 LRP5LA4QPB2 252 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZSCAN5BA6NJL1 495 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 J3QW42 95 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 NXPH2O95156 264 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 CRYAAP02489 173 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 SCTP09683 121 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 PGAM2P15259 253 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 RCC1P18754 421 aaPredicted RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 MPZP25189 248 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 CD34P28906 385 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ERP29P30040 261 aaKnown RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 UCNP55089 124 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ARL6IP1Q15041 203 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 LRRC37A5PQ49AS3 106 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 RGS7BPQ6MZT1 257 aaPredicted RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 LYG2Q86SG7 212 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 C11orf53Q8IXP5 236 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 SAXO1Q8IYX7 474 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 SPICQ8N5J4 248 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZDHHC22Q8N966 263 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 BOLLQ8N9W6 283 aaKnown RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 OR5T2Q8NGG2 359 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZFAND1Q8TCF1 268 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZCCHC14Q8WYQ9 949 aaKnown RBP5.28□□□□□ -1.56
CLK1-210ENST00000473565 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 PCDHB16Q9NRJ7 776 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 TREM2Q9NZC2 230 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 GPR132Q9UNW8 380 aa5.28□□□□□ -1.56
CLK1-210ENST00000473565 ZNF835Q9Y2P0 537 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms