RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 LGALSLQ3ZCW2 172 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 FAM27D1Q5T7N8 215 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 OTUD1Q5VV17 481 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 SIAH3Q8IW03 269 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ZNF486Q96H40 463 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 CXorf58Q96LI9 332 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 NDUFB11Q9NX14 153 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 GAB2Q9UQC2 676 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ZNF724A8MTY0 619 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 H3BP45 60 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 TBCEQ15813 527 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 H3F3CQ6NXT2 135 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 DGAT2L6Q6ZPD8 337 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ITLN2Q8WWU7 325 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 CLEC2DQ9UHP7 191 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 MYO18AQ92614 2054 aaKnown RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 THY1P04216 161 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 NTF3P20783 257 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 CMPK2Q5EBM0 449 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 C8orf46Q8TAG6 207 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 SSC4DQ8WTU2 575 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 R3HDM4Q96D70 268 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ADGRL4Q9HBW9 690 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 BCL2L10Q9HD36 194 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 COL18A1P39060 1754 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 IGKV3OR2-268A0A0C4DH90 116 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 hCG_38984A0A1B0GV85 526 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 LIPT2A6NK58 231 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 UPK1BO75841 260 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 PSMB1P20618 241 aaKnown RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 PRDX2P32119 198 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 MEOX2P50222 304 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ETV1P50549 477 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ACVR1Q04771 509 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 PPP1R32Q7Z5V6 425 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 C11orf44Q8N8P7 122 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 AMER3Q8N944 861 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 TMEM174Q8WUU8 243 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 METTL17Q9H7H0 456 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 GZMHP20718 246 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 AESQ08117 197 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 HAGHQ16775 308 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 RHOUQ7L0Q8 258 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 TMEM123Q8N131 208 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 FAM57AQ8TBR7 257 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 TEX37Q96LM6 180 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 OR2M2Q96R28 347 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ZNF230Q9UIE0 474 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 TRIP11Q15643 1979 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 ATP6V1G2-DDX39BF2Z307 99 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 NDUFA2O43678 99 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 CCR6P51684 374 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 PDPNQ86YL7 162 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 OR4P4Q8NGL7 312 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 OR2G2Q8NGZ5 317 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 SLC25A19Q9HC21 320 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 PSORS1C1Q9UIG5 152 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 CSAG2Q9Y5P2 127 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 K7N7A8 449 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 PDGFAP04085 211 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 PTTG1IPP53801 180 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 TEX30Q5JUR7 227 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 FFAR4Q5NUL3 377 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 RPUSD4Q96CM3 377 aaKnown RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 TMEM38BQ9NVV0 291 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 FFAR1O14842 300 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 SYNGR3O43761 229 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 WNT3P56703 355 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 NUTF2P61970 127 aaKnown RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 GNPNAT1Q96EK6 184 aaPredicted RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 MRPL22Q9NWU5 206 aaKnown RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 A0A1B0GU03 582 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 OR2B8PP59922 312 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 FAM222BQ8WU58 562 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 RTN4IP1Q8WWV3 396 aaPredicted RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
CD47-204ENST00000471694 A0A1W2PQD3 144 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 TCRBV3S1A0A5B6 114 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 LIPFP07098 398 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 GZMKP49863 264 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 FAM209AQ5JX71 171 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 NPAS1Q99742 590 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 ANKRD60Q9BZ19 345 aa7.53□□□□□ -1.2
CD47-204ENST00000471694 A0A0B4J2E0 115 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 A0A1B0GX12 115 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 HTR1DP28221 377 aa7.52□□□□□ -1.2
CD47-204ENST00000471694 PMELP40967 661 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms