RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 OR4C45A6NMZ5 311 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SNURFLB1AK76 121 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SHISA8B8ZZ34 492 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM127O75204 238 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SIX1Q15475 284 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF766Q5HY98 468 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SAXO2Q658L1 398 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 ABHD17CQ6PCB6 329 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 OR1F12Q8NHA8 337 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 NUDT8Q8WV74 236 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 LINC00470Q9BZP3 86 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 ARRDC1-AS1Q9H2J1 176 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 LYRM4Q9HD34 91 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 OR2W1Q9Y3N9 320 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 TMED3Q9Y3Q3 217 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 IGKV6D-41A0A0C4DH26 115 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM189A5PLL7 270 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM189-UBE2V1I3L0A0 370 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 WNT1P04628 370 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 ARG1P05089 322 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 FUT3P21217 361 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 CD27P26842 260 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 DLX6P56179 175 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 FOXF1Q12946 379 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 TM4SF20Q53R12 229 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 KHDC3LQ587J8 217 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 ADAMTSL4Q6UY14 1074 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 Q8IYB0 196 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 PELI3Q8N2H9 469 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF680Q8NEM1 530 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 DDB2Q92466 427 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 RAB24Q969Q5 203 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 IP6K3Q96PC2 410 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM204Q9BSN7 226 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 IFITM5A6NNB3 132 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 DSCR3O14972 297 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 FCGR3AP08637 254 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 CCL2P13500 99 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 OTX1P32242 354 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-210ENST00000471181 BTG2P78543 158 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 LINC00303Q3SY05 128 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 SPATA45Q537H7 98 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 DHRS4L2Q6PKH6 230 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 BRWD3Q6RI45 1802 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 LDLRAD3Q86YD5 345 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 OR4D9Q8NGE8 314 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 OR10J6PQ8NGY7 276 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 RAB1CQ92928 201 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 MAP6Q96JE9 813 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 FOXB1Q99853 325 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 ISG20L2Q9H9L3 353 aaKnown RBP6.15□□□□□ -1.43
BRCA1-210ENST00000471181 TREX1Q9NSU2 369 aa6.15□□□□□ -1.43
BRCA1-210ENST00000471181 ITGB4P16144 1822 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 TRGV5A0A0B4J1U4 118 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 PYCARD-AS1I3L0S3 204 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF205O95201 554 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 TGFAP01135 160 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 PTHLHP12272 177 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 LIAT1Q6ZQX7 453 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 KIR3DX1Q9H7L2 352 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 AURKAIP1Q9NWT8 199 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 KLK11Q9UBX7 282 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 TMPRSS2O15393 492 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 KBTBD11O94819 623 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 SDHBP21912 280 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 HOXD9P28356 352 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 MDH2P40926 338 aaKnown RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 CD81P60033 236 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 Q6ZNX1 250 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 R3HDM4Q96D70 268 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 C16orf92Q96LL3 132 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 HDHD3Q9BSH5 251 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 ANGPTL4Q9BY76 406 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 EMCNQ9ULC0 261 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 DHHO43323 396 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 FTH1P19P0C7X4 201 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 GNG3P63215 75 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 FAM109BQ6ICB4 259 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 MORN4Q8NDC4 146 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 OR2A5Q96R48 311 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 ATOH8Q96SQ7 321 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 KLK15Q9H2R5 256 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 NUP188Q5SRE5 1749 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 C7orf71A4D174 169 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 M0QZQ0 153 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 GPX5O75715 221 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 NAT1P18440 290 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 DIO1P49895 249 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 SLC25A35Q3KQZ1 300 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF71Q9NQZ8 489 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 ACER3Q9NUN7 267 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 PRSS50Q9UI38 385 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 MRC1P22897 1456 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 TUBGCP6Q96RT7 1819 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM129A0AVI4 362 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 NPFFO15130 113 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms