RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 FAAP24Q9BTP7 215 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 SAP30LQ9HAJ7 183 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-203ENST00000470339 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 POM121CA8CG34 1229 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 MCRIP1C9JLW8 97 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 SSX5O60225 188 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 DANCRP0C864 163 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 IRF2P14316 349 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 NAT1P18440 290 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 DTYMKP23919 212 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 LMO1P25800 156 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 RNASE12Q5GAN4 147 aaKnown RBP12.74□□□□□ -0.37
COL4A5-203ENST00000470339 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 SHEQ5VZ18 495 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 OLFML2AQ68BL7 652 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 SULT4A1Q9BR01 284 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 CHST6Q9GZX3 395 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 LRBAP50851 2863 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
COL4A5-203ENST00000470339 NAP1L6A6NFF2 107 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-203ENST00000470339 J3QKU1 62 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 WNT9BO14905 357 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 LYRM1O43325 122 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 CD8AP01732 235 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 DUSP1P28562 367 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 SNU13P55769 128 aaKnown RBP12.73□□□□□ -0.37
COL4A5-203ENST00000470339 TAS2R19P59542 299 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 MRPS15P82914 257 aaKnown RBP12.73□□□□□ -0.37
COL4A5-203ENST00000470339 OXA1LQ15070 435 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 ATAD3CQ5T2N8 411 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 C1orf87Q8N0U7 546 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 ZCCHC24Q8N2G6 241 aaKnown RBP12.73□□□□□ -0.37
COL4A5-203ENST00000470339 NUDCD2Q8WVJ2 157 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 RAB1BQ9H0U4 201 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 RIMS4Q9H426 269 aaPredicted RBP12.73□□□□□ -0.37
COL4A5-203ENST00000470339 IFT46Q9NQC8 304 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 ZNF581Q9P0T4 197 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 AK3Q9UIJ7 227 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 EDARQ9UNE0 448 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
COL4A5-203ENST00000470339 DSCAMO60469 2012 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TRAV24A0A0B4J272 114 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 PYCARD-AS1I3L0S3 204 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 OR2H2O95918 312 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 HAND1O96004 215 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 MUC1P15941 1255 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TBPP20226 339 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 FAUP35544 74 aaKnown RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TLE4Q04727 773 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TRIM16LQ309B1 348 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 HOGA1Q86XE5 327 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 SUMF2Q8NBJ7 301 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 CMSS1Q9BQ75 279 aaKnown RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TRAF4Q9BUZ4 470 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 DPCDQ9BVM2 203 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 C11orf54Q9H0W9 315 aaPredicted RBP12.72□□□□□ -0.37
COL4A5-203ENST00000470339 NLKQ9UBE8 527 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 WIPI2Q9Y4P8 454 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 TENM4Q6N022 2769 aa12.72□□□□□ -0.37
COL4A5-203ENST00000470339 LINC00854A0A1B0GVQ3 168 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 A0A1W2PPR1 153 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 H7C1Q1 480 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.37
COL4A5-203ENST00000470339 FSTL3O95633 263 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 CD74P04233 296 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 ZNF44P15621 663 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 EGR1P18146 543 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 RFX2P48378 723 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 KCNJ3P48549 501 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 MRPS11P82912 194 aaKnown RBP12.71□□□□□ -0.37
COL4A5-203ENST00000470339 PDCD1Q15116 288 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 TEX36Q5VZQ5 186 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
COL4A5-203ENST00000470339 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
COL4A5-203ENST00000470339 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 C12orf4Q9NQ89 552 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.37
COL4A5-203ENST00000470339 SPTAN1Q13813 2472 aaKnown RBP12.71□□□□□ -0.37
COL4A5-203ENST00000470339 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 IGHV1-69-2A0A0G2JMI3 117 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 UBE2QL1A1L167 161 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 MEIS3P1A6NDR6 274 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 RFPL4AA6NLU0 287 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 OR2AT4A6NND4 320 aa12.7□□□□□ -0.38
COL4A5-203ENST00000470339 ZNF736B4DX44 427 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-203ENST00000470339 RFPL4AL1F8VTS6 287 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms