RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SF3B6Q9Y3B4 125 aaKnown RBP16.48■□□□□ 0.23
NPHP4-206ENST00000468253 A0A1W2PQ09 198 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 MGST3O14880 152 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 UCHL1P09936 223 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 IGHV4-38-2P0DP08 117 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 SRMP19623 302 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 PRTN3P24158 256 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 ERP29P30040 261 aaKnown RBP16.47■□□□□ 0.23
NPHP4-206ENST00000468253 GP2P55259 537 aaKnown RBP16.47■□□□□ 0.23
NPHP4-206ENST00000468253 BLMHQ13867 455 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 IL13RA2Q14627 380 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 NHLRC3Q5JS37 347 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 GPR157Q5UAW9 335 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 Q6P435 159 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 GDPD3Q7L5L3 318 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 SPARTQ8N0X7 666 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 BPIFB2Q8N4F0 458 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 Q8N7P7 452 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 NKAIN3Q8N8D7 197 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 FOXRED1Q96CU9 486 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-206ENST00000468253 METTL8Q9H825 291 aaKnown RBP16.47■□□□□ 0.23
NPHP4-206ENST00000468253 TCF7L1Q9HCS4 588 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 ONECUT1Q9UBC0 465 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 IL36RNQ9UBH0 155 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 ZNF69Q9UC07 566 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 ING4Q9UNL4 249 aa16.47■□□□□ 0.23
NPHP4-206ENST00000468253 COL6A5A8TX70 2615 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 A0A0G2JK05 382 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 CENPVL3A0A0U1RRI6 287 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 DEGS1O15121 323 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 OR2H2O95918 312 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 CALCBP10092 127 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 GABRA5P31644 462 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 OR3A4PP47883 348 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 UBE2UQ5VVX9 321 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 TMEM91Q6ZNR0 172 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 FCGR1BQ92637 280 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 MRPS24Q96EL2 167 aaKnown RBP16.46■□□□□ 0.23
NPHP4-206ENST00000468253 MS4A7Q9GZW8 240 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-206ENST00000468253 ELL3Q9HB65 397 aaPredicted RBP16.46■□□□□ 0.23
NPHP4-206ENST00000468253 C19orf12Q9NSK7 152 aa16.46■□□□□ 0.23
NPHP4-206ENST00000468253 hCG_1809904A0A1W2PP81 198 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 A0A1W2PPE2 198 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 A0A1W2PR64 198 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 A0A1W2PRV1 198 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 FUOMA2VDF0 154 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 PSPNO60542 156 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 MAS1P04201 325 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 GABRR1P24046 479 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 INSL4Q14641 139 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 HSD17B12Q53GQ0 312 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 TNFRSF14Q92956 283 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 TMEM203Q969S6 136 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 JMJD8Q96S16 334 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 PRDM13Q9H4Q3 707 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 IFT22Q9H7X7 185 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 GHRLQ9UBU3 117 aa16.45■□□□□ 0.22
NPHP4-206ENST00000468253 MAGEA13PA6NCF6 341 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 ARL6IP5O75915 188 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 CDRT1O95170 752 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 HTR3BO95264 441 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 CSTBP04080 98 aaKnown RBP16.44■□□□□ 0.22
NPHP4-206ENST00000468253 CSN2P05814 226 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 GALP22466 123 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 GRK1Q15835 563 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 KCTD21Q4G0X4 260 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 NCR3LG1Q68D85 454 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 ZNF773Q6PK81 442 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 VMO1Q7Z5L0 202 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 LINC00596Q86U02 117 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 LRRTM1Q86UE6 522 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 FAM185AQ8N0U4 392 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 OSR2Q8N2R0 312 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 JAGN1Q8N5M9 183 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 OR4S1Q8NGB4 309 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 OR4M1Q8NGD0 313 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 FAM192AQ9GZU8 254 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 SLITRK2Q9H156 845 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 PPIL3Q9H2H8 161 aaKnown RBP16.44■□□□□ 0.22
NPHP4-206ENST00000468253 NCOR1P1Q9H4R4 102 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 CUBNO60494 3623 aa16.44■□□□□ 0.22
NPHP4-206ENST00000468253 FBN1P35555 2871 aaKnown RBP16.43■□□□□ 0.22
NPHP4-206ENST00000468253 TRAV40A0A0B4J280 105 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 IGHV1-69DA0A0B4J2H0 117 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 hADV38S2A0JD32 116 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 RGS9O75916 674 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-206ENST00000468253 IGHV1-69P01742 117 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 RBP4P02753 201 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 GTF2F2P13984 249 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 ZNF44P15621 663 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 OR3A1P47881 315 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 HILS1P60008 231 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 RPS25P62851 125 aaKnown RBP16.43■□□□□ 0.22
NPHP4-206ENST00000468253 GUCA2AQ02747 115 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 C1orf100Q5SVJ3 147 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 FAM27D1Q5T7N8 215 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 GLT8D1Q68CQ7 371 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 RBMS3Q6XE24 437 aaKnown RBP16.43■□□□□ 0.22
NPHP4-206ENST00000468253 C11orf42Q8N5U0 333 aa16.43■□□□□ 0.22
NPHP4-206ENST00000468253 ZFAND2BQ8WV99 257 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms