RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 EEF1E1-BLOC1S5C9J1V9 151 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 F5H5P2 479 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 IFNL4K9M1U5 179 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DEGS1O15121 323 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 AGFG2O95081 481 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 NAPSAO96009 420 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 HLA-AP01891 365 aaKnown RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 TK1P04183 234 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 CSN2P05814 226 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 OR5H8P0DN80 308 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 BMP5P22003 454 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DNASE1P24855 282 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 NPBWR2P48146 333 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 KLF3P57682 345 aaPredicted RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 NKX6-1P78426 367 aaPredicted RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 ZNF154Q13106 437 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 IKZF1Q13422 519 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 TSC22D1Q15714 1073 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DMRTC1Q5HYR2 192 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 SPATA46Q5T0L3 261 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 MYPOPQ86VE0 399 aaPredicted RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 MUC20Q8N307 709 aaPredicted RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 SCCPDHQ8NBX0 429 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 GRPEL2Q8TAA5 225 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 PIK3IP1Q96FE7 263 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DMRTB1Q96MA1 342 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DMRTA2Q96SC8 542 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 DIRC2Q96SL1 478 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 SYT3Q9BQG1 590 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 BEX2Q9BXY8 128 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 OR51B6Q9H340 312 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 BEX1Q9HBH7 125 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 HES4Q9HCC6 221 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
MSH5-213ENST00000468136 ASF1BQ9NVP2 202 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 LUZP4Q9P127 313 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
MSH5-213ENST00000468136 IGLV3-9A0A075B6K5 115 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 PLSCR5A0PG75 271 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 OR2AT4A6NND4 320 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 HMSDA8MTL9 139 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 A8MV72 311 aaPredicted RBP8.67□□□□□ -1.02
MSH5-213ENST00000468136 M0R1B8 84 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 ZNHIT1O43257 154 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SYNGR1O43759 233 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 B3GALNT1O75752 331 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SLC22A5O76082 557 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 NXPH2O95156 264 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SVILO95425 2214 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SFT2D2O95562 160 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 KNG1P01042 644 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 CXCL3P19876 107 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 TNFSF4P23510 183 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 MPV17P39210 176 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 CA7P43166 264 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 ZNF83P51522 516 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 PRSS12P56730 875 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SMIM21Q3B7S5 101 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 FBXL19-AS1Q494R0 122 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 ZNF880Q6PDB4 577 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 GAPTQ8N292 157 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 CCDC71LQ8N9Z2 235 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 OR2T35Q8NGX2 323 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 PPP1R35Q8TAP8 253 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 FAM216AQ8WUB2 273 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 CCDC120Q96HB5 630 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 DPCDQ9BVM2 203 aaPredicted RBP8.67□□□□□ -1.02
MSH5-213ENST00000468136 Q9N2K0 584 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 ZDHHC8Q9ULC8 765 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 PTPRQQ9UMZ3 2332 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 PCDHB10Q9UN67 800 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 KCNIP3Q9Y2W7 256 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 ATP23Q9Y6H3 246 aa8.67□□□□□ -1.02
MSH5-213ENST00000468136 TRDCB7Z8K6 153 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 LILRA1O75019 489 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 PGAM2P15259 253 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 LMO1P25800 156 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 CD40P25942 277 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 S100GP29377 79 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 ASCL1P50553 236 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 HERV-K104P61576 105 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 SRPXP78539 464 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 PAX5Q02548 391 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 AADACL3Q5VUY0 350 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 ZNF660Q6AZW8 331 aaPredicted RBP8.66□□□□□ -1.02
MSH5-213ENST00000468136 TRAT1Q6PIZ9 186 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 SGPP2Q8IWX5 399 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 RPRMLQ8N4K4 120 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 SUMF2Q8NBJ7 301 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 OR5M8Q8NGP6 311 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 MARCH1Q8TCQ1 289 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 NEK7Q8TDX7 302 aa8.66□□□□□ -1.02
MSH5-213ENST00000468136 MOB3AQ96BX8 217 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms