RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ALPLP05186 524 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 RPSAP08865 295 aaKnown RBP14.15□□□□□ -0.14
COL7A1-206ENST00000466591 TMEM225BP0DP42 221 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 BRS3P32247 399 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 ALDH3A2P51648 485 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 EMX1Q04741 257 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-206ENST00000466591 CCDC121Q6ZUS5 278 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 DYNAPQ8N1N2 210 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 OR52N4Q8NGI2 321 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 OR4D6Q8NGJ1 314 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 ZNF596Q8TC21 504 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 HRASLS5Q96KN8 279 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 SPACA5Q96QH8 159 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 ALG8Q9BVK2 526 aa14.15□□□□□ -0.14
COL7A1-206ENST00000466591 A0A0G2JK05 382 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 A6NDX4 124 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 MPZL2O60487 215 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OR2H2O95918 312 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OPN1MWP04001 364 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OPN1MW2P0DN77 364 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OPN1MW3P0DN78 364 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 CCR9P51686 369 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 SNRPGP62308 76 aaKnown RBP14.14□□□□□ -0.15
COL7A1-206ENST00000466591 ALKBH1Q13686 389 aaKnown RBP14.14□□□□□ -0.15
COL7A1-206ENST00000466591 ZNF146Q15072 292 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 PRAMEF5Q5TYX0 476 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 CRIP3Q6Q6R5 217 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OR4F17Q8NGA8 305 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 PIFOQ8TCI5 191 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 R3HDM4Q96D70 268 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 OR4F4Q96R69 305 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 MBOAT4Q96T53 435 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 GPER1Q99527 375 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 ZCCHC4Q9H5U6 513 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 ZNF702PQ9H963 129 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 HMG20AQ9NP66 347 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 DHDHQ9UQ10 334 aa14.14□□□□□ -0.15
COL7A1-206ENST00000466591 IGKV1-9A0A0C4DH69 117 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 FAM172BPA6NC97 362 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 DEGS1O15121 323 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 PSPNO60542 156 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 FADS2O95864 444 aaKnown RBP14.13□□□□□ -0.15
COL7A1-206ENST00000466591 CDK2P24941 298 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 ERP29P30040 261 aaKnown RBP14.13□□□□□ -0.15
COL7A1-206ENST00000466591 CEACAM3P40198 252 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 PTGFRP43088 359 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 OR3A1P47881 315 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 NANOS3P60323 173 aaKnown RBP14.13□□□□□ -0.15
COL7A1-206ENST00000466591 ISL1P61371 349 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 AESQ08117 197 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 RBM39Q14498 530 aaKnown RBP14.13□□□□□ -0.15
COL7A1-206ENST00000466591 KRBOX4Q5JUW0 171 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 RTN4RL2Q86UN3 420 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 LHFPL3Q86UP9 236 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 ABHD12Q8N2K0 398 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 CBR4Q8N4T8 237 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 OR5D14Q8NGL3 314 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 FAM192AQ9GZU8 254 aa14.13□□□□□ -0.15
COL7A1-206ENST00000466591 SEBOXQ9HB31 216 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-206ENST00000466591 MEGF11A6BM72 1044 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 XPNPEP2O43895 674 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 CCDC159P0C7I6 412 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 CD28P10747 220 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 DYNLT3P51808 116 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 GBX2P52951 348 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-206ENST00000466591 MRPL28Q13084 256 aaKnown RBP14.12□□□□□ -0.15
COL7A1-206ENST00000466591 FDX2Q6P4F2 183 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 TCF23Q7RTU1 214 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 SATL1Q86VE3 508 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 NDUFA11Q86Y39 141 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 SERPINA12Q8IW75 414 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 CFHR4Q92496 578 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 CREB3L1Q96BA8 519 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 PELI1Q96FA3 418 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 NR1H4Q96RI1 486 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-206ENST00000466591 C9orf16Q9BUW7 83 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 RHOFQ9HBH0 211 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-206ENST00000466591 DPM3Q9P2X0 92 aa14.12□□□□□ -0.15
COL7A1-206ENST00000466591 TMEM212A6NML5 194 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 LEUTXA8MZ59 168 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 G3V4G9 280 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 HSPB6O14558 160 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 PF4V1P10720 104 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 DBTP11182 482 aaKnown RBP14.11□□□□□ -0.15
COL7A1-206ENST00000466591 NFYBP25208 207 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 MNDAP41218 407 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 PRRX1P54821 245 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 ATXN7L3Q14CW9 347 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-206ENST00000466591 SLC25A30Q5SVS4 291 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 LPCAT4Q643R3 524 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 CCBE1Q6UXH8 406 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-206ENST00000466591 CENPVQ7Z7K6 275 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-206ENST00000466591 CHST4Q8NCG5 386 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 OR10AC1Q8NH08 325 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 OR5AK2Q8NH90 309 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 LGALS12Q96DT0 336 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 SERTAD4Q9NUC0 356 aa14.11□□□□□ -0.15
COL7A1-206ENST00000466591 TAS2R3Q9NYW6 316 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms