RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PHC2Q8IXK0 858 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 ASCC1Q8N9N2 400 aaKnown RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 OR4S1Q8NGB4 309 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 OR4M1Q8NGD0 313 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CPNE2Q96FN4 548 aaPredicted RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 C1orf147Q96MC9 270 aaPredicted RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 GPER1Q99527 375 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 YTHDF1Q9BYJ9 559 aaKnown RBP14.51□□□□□ -0.09
VPS52-214ENST00000463486 PRDM13Q9H4Q3 707 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 Q9H521 79 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 ESM1Q9NQ30 184 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 IL36GQ9NZH8 169 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 ONECUT1Q9UBC0 465 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 CKLFQ9UBR5 152 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 DSCAML1Q8TD84 2053 aa14.51□□□□□ -0.09
VPS52-214ENST00000463486 A0A0G2JK05 382 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 RNASEK-C17orf49H0YIS7 233 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 MRPS14O60783 128 aaKnown RBP14.5□□□□□ -0.09
VPS52-214ENST00000463486 RGS9O75916 674 aaPredicted RBP14.5□□□□□ -0.09
VPS52-214ENST00000463486 UCHL1P09936 223 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 EEF1B2P24534 225 aaKnown RBP14.5□□□□□ -0.09
VPS52-214ENST00000463486 FPR2P25090 351 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 RPS25P62851 125 aaKnown RBP14.5□□□□□ -0.09
VPS52-214ENST00000463486 ZNF273Q14593 569 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 KRTAP24-1Q3LI83 254 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 HCP5Q6MZN7 132 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 METAP1DQ6UB28 335 aaPredicted RBP14.5□□□□□ -0.09
VPS52-214ENST00000463486 LRRTM1Q86UE6 522 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 CDH26Q8IXH8 852 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 SPARTQ8N0X7 666 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 ZDHHC22Q8N966 263 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 OR10K1Q8NGX5 313 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 THRSPQ92748 146 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 UFD1Q92890 307 aa14.5□□□□□ -0.09
VPS52-214ENST00000463486 ANK2Q01484 3957 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 IGHV1-69DA0A0B4J2H0 117 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 A0A1W2PQ09 198 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 SIRPB1O00241 398 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 SH2D1BO14796 132 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 IGHV1-69P01742 117 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 MAS1P04201 325 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 HSMCR30P0CW71 290 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 PRTN3P24158 256 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 MAPK3P27361 379 aaPredicted RBP14.49□□□□□ -0.09
VPS52-214ENST00000463486 BPIFB3P59826 476 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 ERVFRD-1P60508 538 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 SSX1Q16384 188 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 FIP1L1Q6UN15 594 aaKnown RBP14.49□□□□□ -0.09
VPS52-214ENST00000463486 CEACAM19Q7Z692 300 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 FAM185AQ8N0U4 392 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 BPIFB2Q8N4F0 458 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 SIGLECL1Q8N7X8 197 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 OR5D13Q8NGL4 314 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 LHX4Q969G2 390 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 TMEM203Q969S6 136 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 CHST6Q9GZX3 395 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 EXOSC4Q9NPD3 245 aaKnown RBP14.49□□□□□ -0.09
VPS52-214ENST00000463486 SIRT7Q9NRC8 400 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 ZNF581Q9P0T4 197 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 LRRC42Q9Y546 428 aa14.49□□□□□ -0.09
VPS52-214ENST00000463486 A0A1W2PP11 408 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 SLC33A1O00400 549 aaPredicted RBP14.48□□□□□ -0.09
VPS52-214ENST00000463486 RRP9O43818 475 aaKnown RBP14.48□□□□□ -0.09
VPS52-214ENST00000463486 CCL3L1P16619 93 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 BMXP51813 675 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 PIGYQ3MUY2 71 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 NHLRC3Q5JS37 347 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 GPR157Q5UAW9 335 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 ZNF367Q7RTV3 350 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 CMTM4Q8IZR5 234 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 OR4D6Q8NGJ1 314 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 TBC1D15Q8TC07 691 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 ZNF418Q8TF45 676 aaPredicted RBP14.48□□□□□ -0.09
VPS52-214ENST00000463486 PHYHIPQ92561 330 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 SUCNR1Q9BXA5 334 aa14.48□□□□□ -0.09
VPS52-214ENST00000463486 MS4A7Q9GZW8 240 aaPredicted RBP14.48□□□□□ -0.09
VPS52-214ENST00000463486 METTL8Q9H825 291 aaKnown RBP14.48□□□□□ -0.09
VPS52-214ENST00000463486 TRAV24A0A0B4J272 114 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 C17orf98A8MV24 154 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 MGST3O14880 152 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 SRMP19623 302 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 GABRR1P24046 479 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 ERP29P30040 261 aaKnown RBP14.47□□□□□ -0.09
VPS52-214ENST00000463486 MEF2CQ06413 473 aaPredicted RBP14.47□□□□□ -0.09
VPS52-214ENST00000463486 IL13RA2Q14627 380 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 RSU1Q15404 277 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 GRK1Q15835 563 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 DEFB112Q30KQ8 113 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 UBE2UQ5VVX9 321 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 PDZD9Q8IXQ8 264 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 TPRX1Q8N7U7 411 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 CHST4Q8NCG5 386 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 MUL1Q969V5 352 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 AJUBAQ96IF1 538 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 GFI1Q99684 422 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 FAM192AQ9GZU8 254 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 GLS2Q9UI32 602 aa14.47□□□□□ -0.09
VPS52-214ENST00000463486 ING4Q9UNL4 249 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms