RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-215	ENST00000461778	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	DECR2	Q9NUI1	292 aa		11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	TMEM100	Q9NV29	134 aa		11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	ELOVL5	Q9NYP7	299 aa		11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	PIPOX	Q9P0Z9	390 aa		11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	ZNF222	Q9UK12	451 aa		11.15	□□□□□ -0.62
NR1H3-215	ENST00000461778	USP9Y	O00507	2555 aa	Predicted RBP	11.15	□□□□□ -0.63
NR1H3-215	ENST00000461778	IGKV1D-8	A0A087WSZ0	117 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	UBE2QL1	A1L167	161 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	NOS1AP	O75052	506 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	FCGR3A	P08637	254 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZBTB25	P24278	435 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	OR3A3	P47888	321 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	UBE2M	P61081	183 aa	Known RBP	11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	RBPJ	Q06330	500 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	MPPED2	Q15777	294 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	NLRC3	Q7RTR2	1065 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	TMEM17	Q86X19	198 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	FAM58A	Q8N1B3	248 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	SPERT	Q8NA61	448 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	OR2AK2	Q8NG84	335 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	OR13G1	Q8NGZ3	307 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	CAPSL	Q8WWF8	208 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	RADIL	Q96JH8	1075 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	HYLS1	Q96M11	299 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	SCGB3A2	Q96PL1	93 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	PPA2	Q9H2U2	334 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	FN3KRP	Q9HA64	309 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	MGAT4C	Q9UBM8	478 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZNF69	Q9UC07	566 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	ANXA10	Q9UJ72	324 aa		11.14	□□□□□ -0.63
NR1H3-215	ENST00000461778	DIDO1	Q9BTC0	2240 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	GIP	P09681	153 aa	Predicted RBP	11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	HLA-G	P17693	338 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	IFITM2	Q01629	132 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	SURF2	Q15527	256 aa	Predicted RBP	11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	CHRFAM7A	Q494W8	412 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	C4orf17	Q53FE4	359 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	AADACL3	Q5VUY0	350 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	DHRS11	Q6UWP2	260 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778		Q8IYB0	196 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	SCCPDH	Q8NBX0	429 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZFAND1	Q8TCF1	268 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	ASB13	Q8WXK3	278 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	MUCL1	Q96DR8	90 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	DMRTA2	Q96SC8	542 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	ADAT1	Q9BUB4	502 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	TLNRD1	Q9H1K6	362 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	CXXC4	Q9H2H0	198 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	SPACA1	Q9HBV2	294 aa		11.13	□□□□□ -0.63
NR1H3-215	ENST00000461778	SPTAN1	Q13813	2472 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	TRBV6-6	A0A0A6YYG2	114 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	POM121C	A8CG34	1229 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778		G3V3Q6	166 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778		H0YL77	283 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	MLNR	O43193	412 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	RHBDL1	O75783	438 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	OR7C1	O76099	320 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	NAPSA	O96009	420 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	RNF224	P0DH78	156 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	PGA5	P0DJD9	388 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZNF250	P15622	560 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	FPR2	P25090	351 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	GLRX	P35754	106 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	ECI1	P42126	302 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	TAS2R31	P59538	309 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	RAP2B	P61225	183 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	TSPAN5	P62079	268 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	NKX6-1	P78426	367 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	MRPS15	P82914	257 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	SRSF4	Q08170	494 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	FAM27E3	Q08E93	113 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	ZNF154	Q13106	437 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	PDCD1	Q15116	288 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	OR8G1	Q15617	311 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	C2orf68	Q2NKX9	166 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	C4orf46	Q504U0	113 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	LAMTOR1	Q6IAA8	161 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778		Q6P435	159 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	BRICD5	Q6PL45	260 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778		Q6ZPA2	131 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778		Q6ZR03	302 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	SSX8	Q7RTT4	187 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	LYG2	Q86SG7	212 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	C11orf53	Q8IXP5	236 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	RELL2	Q8NC24	303 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	MARCH1	Q8TCQ1	289 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	MAFIP	Q8WZ33	124 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	DHRS9	Q9BPW9	319 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	NRIP2	Q9BQI9	281 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	CA10	Q9NS85	328 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	EHF	Q9NZC4	300 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	TINAG	Q9UJW2	476 aa		11.12	□□□□□ -0.63
NR1H3-215	ENST00000461778	POLDIP2	Q9Y2S7	368 aa		11.12	□□□□□ -0.63

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