RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF17P17021 662 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 CHRNB4P30926 498 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 LINC01590Q5TEZ4 76 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 HOGA1Q86XE5 327 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 C12orf57Q99622 126 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 TRBV5-7A0A0A0MS05 114 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 PATE3B3GLJ2 98 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 OR7C2O60412 319 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 MLF1P58340 268 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF90Q03938 601 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 GPR27Q9NS67 375 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 TMEM218A2RU14 115 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 METTL15P1P0C7V9 234 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 SKA3Q8IX90 412 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 SLC25A45Q8N413 288 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 SDHCQ99643 169 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF355PQ9NSJ1 428 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 PPYP01298 95 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 NPBWR1P48145 328 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 RPS16P62249 146 aaKnown RBP12.96□□□□□ -0.33
PTPRU-205ENST00000460170 C19orf57Q0VDD7 668 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
PTPRU-205ENST00000460170 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 POMT1Q9Y6A1 747 aa12.96□□□□□ -0.33
PTPRU-205ENST00000460170 A0A0J9YW62 118 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 TBX6O95947 436 aaPredicted RBP12.96□□□□□ -0.34
PTPRU-205ENST00000460170 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.34
PTPRU-205ENST00000460170 UBE2G1P62253 170 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 SLC38A11Q08AI6 406 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 C4orf17Q53FE4 359 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.34
PTPRU-205ENST00000460170 ESRP2Q9H6T0 727 aaKnown RBP12.96□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.34
PTPRU-205ENST00000460170 SLC2A9Q9NRM0 540 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 TRDCB7Z8K6 153 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 SEMA7AO75326 666 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 FABP1P07148 127 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 MAGEA5P43359 124 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 SPEM2Q0P670 501 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 IGFBP7Q16270 282 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 HES3Q5TGS1 186 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 FAM27BQ5VT28 67 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 LYPD8Q6UX82 237 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 STPG2Q8N412 459 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 TIMD4Q96H15 378 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 AICDAQ9GZX7 198 aa12.96□□□□□ -0.34
PTPRU-205ENST00000460170 P2RY1P47900 373 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF345Q14585 488 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 TMEM211Q6ICI0 200 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 CDX2Q99626 313 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-205ENST00000460170 A0A1W2PPQ1 181 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 OR10J4P0C629 311 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 VDAC1P21796 283 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 DMWDQ09019 674 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 DCAF12L2Q5VW00 463 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 TNFSF18Q9UNG2 199 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-205ENST00000460170 ISG15P05161 165 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 RNF212Q495C1 297 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 C1orf100Q5SVJ3 147 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 PSG11Q9UQ72 335 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 R4GN57 208 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 TDRD6O60522 2096 aaKnown RBP12.95□□□□□ -0.34
PTPRU-205ENST00000460170 SHISA3A0PJX4 238 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 C21orf140B9A014 251 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF205O95201 554 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 CXCL2P19875 107 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 ZNF83P51522 516 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 IFITM2Q01629 132 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 HABP2Q14520 560 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-205ENST00000460170 CLEC12BQ2HXU8 276 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 PIGYQ3MUY2 71 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 A0A0G2JMZ2 1700 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
PTPRU-205ENST00000460170 A0A0U1RQV5 110 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 OR5G3P0C626 314 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 OR3A1P47881 315 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
PTPRU-205ENST00000460170 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 UBE2G2P60604 165 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 IL24Q13007 206 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 TGIF2Q9GZN2 237 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 LPAR3Q9UBY5 353 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 MS4A18H0YCH9 400 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 ACTL6AO96019 429 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 TNFRSF1AP19438 455 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 MPV17LQ2QL34 196 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 MS4A18Q3C1V0 323 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 FZR1Q9UM11 496 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 ANK1P16157 1881 aa12.94□□□□□ -0.34
PTPRU-205ENST00000460170 NYNRINQ9P2P1 1898 aaKnown RBP12.94□□□□□ -0.34
PTPRU-205ENST00000460170 MEX3AA1L020 520 aaKnown RBP12.94□□□□□ -0.34
PTPRU-205ENST00000460170 C20orf202A1L168 122 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms