RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MMP16P51512 607 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 MLF1P58340 268 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 ERVFRD-1P60508 538 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 POLR2GP62487 172 aaKnown RBP eCLIP8.68□□□□□ -1.02
UFD1-205ENST00000459854 SRYQ05066 204 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 CDKN3Q16667 212 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 PUSL1Q8N0Z8 303 aaKnown RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 SIRT5Q9NXA8 310 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 PILRBQ9UKJ0 227 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 LIPGQ9Y5X9 500 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 DEFA4P12838 97 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 EPHA8P29322 1005 aaPredicted RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 SSR4P51571 173 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 MVDP53602 400 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 RIGQ13278 110 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 SAPCD1Q5SSQ6 148 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 C10orf35Q96D05 121 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 COX14Q96I36 57 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 CORTO00230 105 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 ZBTB25P24278 435 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 CHRNA7P36544 502 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 RPS23P62266 143 aaKnown RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 NKAIN1Q4KMZ8 207 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 PWWP2BQ6NUJ5 590 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 OR5D13Q8NGL4 314 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 MS4A7Q9GZW8 240 aaPredicted RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 SH2D2AQ9NP31 389 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 PCDHGA9Q9Y5G4 932 aaKnown RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 TMEM210A6NLX4 147 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 GEMIN2O14893 280 aaKnown RBP8.68□□□□□ -1.02
UFD1-205ENST00000459854 OR2J2O76002 312 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 GYPAP02724 150 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 LYPD8Q6UX82 237 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 MUCL1Q96DR8 90 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 PPP1R3EQ9H7J1 279 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 ST3GAL6Q9Y274 331 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 SIGLEC7Q9Y286 467 aa8.68□□□□□ -1.02
UFD1-205ENST00000459854 C2orf16Q68DN1 1984 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 A0A0B4J293 547 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 A0A1W2PR48 441 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 SERF2P84101 59 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 FUT7Q11130 342 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 ISXQ2M1V0 245 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 NHLRC3Q5JS37 347 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 LRRC61Q9BV99 259 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 HELTA6NFD8 242 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 HSPB6O14558 160 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 PCNTO95613 3336 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 HOXD4P09016 255 aaPredicted RBP8.67□□□□□ -1.02
UFD1-205ENST00000459854 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 WDFY1Q8IWB7 410 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 BCORP1Q8N888 145 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 MRGPRX4Q96LA9 322 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 TNFRSF12AQ9NP84 129 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 SLC22A13Q9Y226 551 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 ZNF835Q9Y2P0 537 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 TRBV9A0A0B4J1U6 114 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.67□□□□□ -1.02
UFD1-205ENST00000459854 TLCD2A6NGC4 264 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 PITX3O75364 302 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 PTGER1P34995 402 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 FAM27D1Q5T7N8 215 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 WDR74Q6RFH5 385 aaPredicted RBP8.67□□□□□ -1.02
UFD1-205ENST00000459854 ZNF740Q8NDX6 193 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 ZG16BQ96DA0 208 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 AAMDCQ9H7C9 122 aa8.67□□□□□ -1.02
UFD1-205ENST00000459854 IGLV3-16A0A075B6K0 115 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 A0A087WUJ7 227 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 CRYM-AS1A6NIL9 109 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 UPK1AO00322 258 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 OPRM1P35372 400 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 PNLIPRP2P54317 469 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 BOD1Q96IK1 185 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 TECRQ9NZ01 308 aaKnown RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 CTXND1A0A1B0GTU2 59 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 C11orf94C9JXX5 98 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 ADAM20O43506 726 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 HBZP02008 142 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 HPXP02790 462 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 CLEC3BP05452 202 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 RUNX2Q13950 521 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 GALMQ96C23 342 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 OR2V2Q96R30 315 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 MENTQ9BUN1 341 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 GGACTQ9BVM4 153 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 HTTP42858 3142 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 ENSAO43768 121 aaKnown RBP8.66□□□□□ -1.02
UFD1-205ENST00000459854 OPN1LWP04000 364 aa8.66□□□□□ -1.02
UFD1-205ENST00000459854 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms