RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR6K3Q8NGY3 331 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 IL1F10Q8WWZ1 152 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 OR5P3Q8WZ94 311 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 MYOZ1Q9NP98 299 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 MBD2Q9UBB5 411 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 OSGIN2Q9Y236 505 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 TLN1Q9Y490 2541 aaKnown RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 SIRPB1O00241 398 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 CDIPTO14735 213 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 PLEKHN1Q494U1 663 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 FAHD2BQ6P2I3 314 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 RPRMLQ8N4K4 120 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 DCUN1D4Q92564 292 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 FAHD2AQ96GK7 314 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 MARS2Q96GW9 593 aaKnown RBP11.7□□□□□ -0.54
CLK3-203ENST00000454830 TRAV39A0A0B4J263 110 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 TEX46H3BTG2 121 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 NXPH2O95156 264 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 FGF12P61328 243 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 IGSF11Q5DX21 431 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 IGF2-ASQ6U949 168 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 GALNT11Q8NCW6 608 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 SECTM1Q8WVN6 248 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 HEXA-AS1Q9H8Q6 139 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 KCNIP3Q9Y2W7 256 aa11.7□□□□□ -0.54
CLK3-203ENST00000454830 OR5B21A6NL26 309 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 SLC34A2O95436 690 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 MPZP25189 248 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 GCH1P30793 250 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ZNF83P51522 516 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ANKRD55Q3KP44 614 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 SCNM1Q9BWG6 230 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
CLK3-203ENST00000454830 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ANKRD34BA5PLL1 514 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 IFNA2P01563 188 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
CLK3-203ENST00000454830 DTYMKP23919 212 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
CLK3-203ENST00000454830 ASCL4Q6XD76 172 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
CLK3-203ENST00000454830 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
CLK3-203ENST00000454830 IL36GQ9NZH8 169 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ZFHX4Q86UP3 3567 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 DEGS1O15121 323 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ZNF565Q8N9K5 539 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 ANAPC10Q9UM13 185 aa11.69□□□□□ -0.54
CLK3-203ENST00000454830 F5H0A9 414 aaPredicted RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 CCDC36Q8IYA8 594 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 CISD2Q8N5K1 135 aaKnown RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 MSL2Q9HCI7 577 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 TRAV14DV4A0A0A6YYC5 116 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 CA11O75493 328 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 IFNA21P01568 189 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 BMP5P22003 454 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 PTGER4P35408 488 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 MPV17P39210 176 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 BOLLQ8N9W6 283 aaKnown RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 RTN4IP1Q8WWV3 396 aaPredicted RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 ABHD17AQ96GS6 310 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 PLCE1Q9P212 2302 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 HMSDA8MTL9 139 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 M0R1B8 84 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 DIRAS3O95661 229 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 CRYABP02511 175 aaKnown RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 TK1P04183 234 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 PSMB6P28072 239 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 PSG7Q13046 419 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 PAN3Q58A45 887 aaKnown RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 BHLHA15Q7RTS1 189 aaPredicted RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 LHFPL1Q86WI0 220 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 TMEM185AQ8NFB2 350 aa11.68□□□□□ -0.54
CLK3-203ENST00000454830 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
CLK3-203ENST00000454830 H0YL77 283 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 HSPA12AO43301 675 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 MEX3AA1L020 520 aaKnown RBP11.67□□□□□ -0.54
CLK3-203ENST00000454830 CEACAM4O75871 244 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 CECR9P0C854 216 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 CBR1P16152 277 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 AADACP22760 399 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
CLK3-203ENST00000454830 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
CLK3-203ENST00000454830 NSUN5P2Q63ZY6 315 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 UNQ6126/PRO20091Q6UXV3 157 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 OR11L1Q8NGX0 322 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 TMEM100Q9NV29 134 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 MSTNO14793 375 aa11.67□□□□□ -0.54
CLK3-203ENST00000454830 SCTP09683 121 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms