RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 COX7A1P24310 79 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 PRDX2P32119 198 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 RIDAP52758 137 aaKnown RBP9.39□□□□□ -0.91
HERC3-207ENST00000452979 CAPZA1P52907 286 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 DLX6P56179 175 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 NANOS3P60323 173 aaKnown RBP9.39□□□□□ -0.91
HERC3-207ENST00000452979 BLCAPP62952 87 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 CD83Q01151 205 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 LDLRAD2Q5SZI1 272 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 ZBTB37Q5TC79 503 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 ZNF773Q6PK81 442 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 Q6ZS46 218 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 FAM220AQ7Z4H9 259 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 SPARTQ8N0X7 666 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 NANOGP1Q8N7R0 232 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 YIPF7Q8N8F6 280 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 POC1AQ8NBT0 407 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 OR11H6Q8NGC7 330 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 RPS4Y2Q8TD47 263 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 MND1Q9BWT6 205 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
HERC3-207ENST00000452979 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 MYL12BO14950 172 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 IGLV3-1P01715 115 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 RBP4P02753 201 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 TK1P04183 234 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 PGA5P0DJD9 388 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 ATP6V1B1P15313 513 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 CD33P20138 364 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 KIR3DL2P43630 455 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
HERC3-207ENST00000452979 WNT4P56705 351 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 RIPPLY1Q0D2K3 151 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 ZNF273Q14593 569 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 SMIM21Q3B7S5 101 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 CEP78Q5JTW2 689 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
HERC3-207ENST00000452979 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 FOXRED1Q96CU9 486 aaPredicted RBP9.38□□□□□ -0.91
HERC3-207ENST00000452979 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 ACOT13Q9NPJ3 140 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 ABCB10Q9NRK6 738 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 ERGIC3Q9Y282 383 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 SIRT4Q9Y6E7 314 aaPredicted RBP9.38□□□□□ -0.91
HERC3-207ENST00000452979 R4GMQ9 66 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 DSCAML1Q8TD84 2053 aa9.38□□□□□ -0.91
HERC3-207ENST00000452979 TMEM269A0A1B0GVZ9 245 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 TRIM64CA6NLI5 447 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 LOC110117498-PIK3R3F6TDL0 507 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 MRPS14O60783 128 aaKnown RBP9.37□□□□□ -0.91
HERC3-207ENST00000452979 PEX14O75381 377 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 TTRP02766 147 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 ALDOBP05062 364 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 ARG1P05089 322 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 SSX2Q16385 188 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 ZNF829Q3KNS6 432 aaPredicted RBP9.37□□□□□ -0.91
HERC3-207ENST00000452979 ZNF626Q68DY1 528 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 FDX2Q6P4F2 183 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 TMPRSS11AQ6ZMR5 421 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 MOB3CQ70IA8 216 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 CATSPERDQ86XM0 798 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 ZFP41Q8N8Y5 198 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 TSPAN14Q8NG11 270 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 OR13D1Q8NGV5 346 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 ZNF488Q96MN9 340 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 HES4Q9HCC6 221 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 CHCHD3Q9NX63 227 aaKnown RBP9.37□□□□□ -0.91
HERC3-207ENST00000452979 NUFIP1Q9UHK0 495 aaKnown RBP9.37□□□□□ -0.91
HERC3-207ENST00000452979 SLC22A13Q9Y226 551 aa9.37□□□□□ -0.91
HERC3-207ENST00000452979 FAM90A22PA8MWA6 464 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 K7N7A8 449 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 VDAC2P45880 294 aaPredicted RBP9.36□□□□□ -0.91
HERC3-207ENST00000452979 CEBPDP49716 269 aaPredicted RBP9.36□□□□□ -0.91
HERC3-207ENST00000452979 CDK5R1Q15078 307 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 SPHARQ15513 63 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 MED22Q15528 200 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 TCTEX1D4Q5JR98 221 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 BCL2L15Q5TBC7 163 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 C11orf87Q6NUJ2 197 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 ZNF782Q6ZMW2 699 aaPredicted RBP9.36□□□□□ -0.91
HERC3-207ENST00000452979 KCTD20Q7Z5Y7 419 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 OR2G2Q8NGZ5 317 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 MRPL48Q96GC5 212 aaKnown RBP9.36□□□□□ -0.91
HERC3-207ENST00000452979 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 OPALINQ96PE5 141 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 NRIP2Q9BQI9 281 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 PBOV1Q9GZY1 135 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 MOB1AQ9H8S9 216 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 BABAM2Q9NXR7 383 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 FRRS1LQ9P0K9 344 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 OR52A1Q9UKL2 312 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 GTF2A1LQ9UNN4 478 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 SNX5Q9Y5X3 404 aa9.36□□□□□ -0.91
HERC3-207ENST00000452979 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms