RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ALX4Q9H161 411 aaPredicted RBP12.08□□□□□ -0.48
USP39-207ENST00000450066 HES4Q9HCC6 221 aa12.08□□□□□ -0.48
USP39-207ENST00000450066 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
USP39-207ENST00000450066 ZSCAN5BA6NJL1 495 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
USP39-207ENST00000450066 NXPH2O95156 264 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 ZNF146Q15072 292 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 MPPED2Q15777 294 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 SPIN3Q5JUX0 258 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 LRRC46Q96FV0 321 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 MED28Q9H204 178 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 ERRFI1Q9UJM3 462 aaPredicted RBP12.07□□□□□ -0.48
USP39-207ENST00000450066 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 TMEM82A0PJX8 343 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 NKX2-6A6NCS4 301 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 CD276Q5ZPR3 534 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 WDR82Q6UXN9 313 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 SLC36A1Q7Z2H8 476 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 TMEM17Q86X19 198 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 SUMF2Q8NBJ7 301 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 TERB2Q8NHR7 220 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
USP39-207ENST00000450066 MRGPRFQ96AM1 343 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
USP39-207ENST00000450066 ELMOD3Q96FG2 381 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 ESRP2Q9H6T0 727 aaKnown RBP12.07□□□□□ -0.48
USP39-207ENST00000450066 TAAR3PQ9P1P4 343 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 NDRG3Q9UGV2 375 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
USP39-207ENST00000450066 TRAV24A0A0B4J272 114 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 A6NLC8 198 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 OR2AT4A6NND4 320 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 DEGS1O15121 323 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 HPXP02790 462 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 ARPC4P59998 168 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 TSPAN5P62079 268 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 SORDQ00796 357 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 GRK1Q15835 563 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 ATPAF1Q5TC12 328 aaPredicted RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 Q6P435 159 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 FIP1L1Q6UN15 594 aaKnown RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 GPN1Q9HCN4 374 aaPredicted RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 MYOZ1Q9NP98 299 aaPredicted RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 EHFQ9NZC4 300 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 ZNF221Q9UK13 617 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 FAM221AA4D161 298 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 NAPSAO96009 420 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 VSIG10L2P0DP72 767 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 RBM39Q14498 530 aaKnown RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 CDK10Q15131 360 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP39-207ENST00000450066 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 CCDC107Q8WV48 283 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 DPCDQ9BVM2 203 aaPredicted RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
USP39-207ENST00000450066 KCNJ16Q9NPI9 418 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 UFSP2Q9NUQ7 469 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
USP39-207ENST00000450066 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 CEACAM18A8MTB9 384 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 HS3ST1O14792 307 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 SH2D1BO14796 132 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 SSNA1O43805 119 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
USP39-207ENST00000450066 ZNF44P15621 663 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 CFHR2P36980 270 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 ZNF81P51508 661 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 ADIPOQQ15848 244 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 Q6ZS49 121 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 ZNF286AQ9HBT8 521 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
USP39-207ENST00000450066 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 ZDHHC8Q9ULC8 765 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
USP39-207ENST00000450066 A8MV72 311 aaPredicted RBP12.04□□□□□ -0.48
USP39-207ENST00000450066 SDCBPO00560 298 aaPredicted RBP12.04□□□□□ -0.48
USP39-207ENST00000450066 GMFBP60983 142 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 CD83Q01151 205 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 FCN2Q15485 313 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 CDSNQ15517 529 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 ZNF626Q68DY1 528 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 ADAM5Q6NVV9 412 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 Q6ZPA2 131 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 OR10Z1Q8NGY1 313 aa12.04□□□□□ -0.48
USP39-207ENST00000450066 RDH5Q92781 318 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms