RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OR52B4Q8NGK2 314 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 GTF3AQ92664 365 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 OR2A7Q96R45 310 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 DHRS9Q9BPW9 319 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 RIMS4Q9H426 269 aaPredicted RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 SLA2Q9H6Q3 261 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 CRIM1Q9NZV1 1036 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 PURGQ9UJV8 347 aaKnown RBP9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 VSIG4Q9Y279 399 aa9.02□□□□□ -0.96
VIPAS39-203ENST00000448935 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 OR2AT4A6NND4 320 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 A8MXE2 369 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 MCRIP1C9JLW8 97 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 SYNGR1O43759 233 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 TIMM8AO60220 97 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 SLC22A5O76082 557 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 RGS11O94810 467 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 CRYAAP02489 173 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 ACAA1P09110 424 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 PRKACAP17612 351 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 C4BPBP20851 252 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 CD34P28906 385 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 IL13RA1P78552 427 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 DHRS2Q13268 280 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 FIP1L1Q6UN15 594 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 Q6ZS49 121 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 FAM58AQ8N1B3 248 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 RPRMLQ8N4K4 120 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 UXS1Q8NBZ7 420 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 TMEM185AQ8NFB2 350 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 OR2T35Q8NGX2 323 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 MARCH1Q8TCQ1 289 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 S100PBPQ96BU1 408 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 SNRNP40Q96DI7 357 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 RADILQ96JH8 1075 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 PHB2Q99623 299 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 GON7Q9BXV9 100 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 RCC2Q9P258 522 aaKnown RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF230Q9UIE0 474 aaPredicted RBP9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 ITGB1BP2Q9UKP3 347 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 GPR132Q9UNW8 380 aa9.02□□□□□ -0.97
VIPAS39-203ENST00000448935 TRAV20A0A0B4J274 112 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 F5H5P2 479 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 RGS13O14921 159 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 ZBTB25P24278 435 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 GLP1RP43220 463 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 ERVS71-1P61550 626 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 NAAAQ02083 359 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 IKZF1Q13422 519 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 FAM209AQ5JX71 171 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 RGS7BPQ6MZT1 257 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 PEG10Q86TG7 708 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 OR13G1Q8NGZ3 307 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 MRGPRFQ96AM1 343 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 WNT10AQ9GZT5 417 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 IFT22Q9H7X7 185 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 CHMP1AQ9HD42 196 aaPredicted RBP9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 MGAT4AQ9UM21 535 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 C14orf166Q9Y224 244 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 OSGIN2Q9Y236 505 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
VIPAS39-203ENST00000448935 C9orf170A2RU37 121 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 ANKRD34BA5PLL1 514 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 EEF1E1-BLOC1S5C9J1V9 151 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 SMLR1H3BR10 107 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 H7C1Q1 480 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 SDCBPO00560 298 aaPredicted RBP9□□□□□ -0.97
VIPAS39-203ENST00000448935 GOSR2O14653 212 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 DUS4LO95620 317 aaKnown RBP9□□□□□ -0.97
VIPAS39-203ENST00000448935 FAM87AP0C7U9 286 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 OR5H8P0DN80 308 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 AKR1C4P17516 323 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 HLA-GP17693 338 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 BMP5P22003 454 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 CALCRP30988 508 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 MPV17P39210 176 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 NPY4RP50391 375 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 CASP6P55212 293 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 GMFBP60983 142 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 DHODHQ02127 395 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
VIPAS39-203ENST00000448935 SCCPDHQ8NBX0 429 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 MITD1Q8WV92 249 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 MAFIPQ8WZ33 124 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 TMEM246Q9BRR3 403 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 HDHD3Q9BSH5 251 aaPredicted RBP9□□□□□ -0.97
VIPAS39-203ENST00000448935 GLS2Q9UI32 602 aa9□□□□□ -0.97
VIPAS39-203ENST00000448935 SVILO95425 2214 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 A0A0B4J2A0 478 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 KIR2DS1A0A191URI9 304 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 M0R1B8 84 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 NOS1APO75052 506 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 PGAM2P15259 253 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 MDH2P40926 338 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms