RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ISXQ2M1V0 245 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 FNDC7Q5VTL7 733 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 LRP11Q86VZ4 500 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR4D11Q8NGI4 311 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR5D13Q8NGL4 314 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR6X1Q8NH79 312 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SARGQ9BW04 601 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SLC52A3Q9NQ40 469 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM167BQ9NRX6 74 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 IL36GQ9NZH8 169 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SERGEFQ9UGK8 458 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 NPIPB8E9PQR5 432 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SOCS1O15524 211 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 CCL7P80098 99 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 DLK1P80370 383 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 FZD5Q13467 585 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM97Q5BJF2 176 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 LYRM7Q5U5X0 104 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 FAM109BQ6ICB4 259 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 TBC1D26Q86UD7 250 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 OR10AC1Q8NH08 325 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 DYRK2Q92630 601 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 MS4A7Q9GZW8 240 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 SLC7A10Q9NS82 523 aa6.89□□□□□ -1.31
NEDD9-204ENST00000448183 ELF5Q9UKW6 265 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-204ENST00000448183 DDX60LQ5H9U9 1706 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 A0A1W2PN81 502 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 CHST1O43916 411 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 CDS2O95674 445 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ANKRD34CP0C6C1 535 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 HOXB3P14651 431 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 OR3A1P47881 315 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 CD81P60033 236 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 IFITM3Q01628 133 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 HIST3H3Q16695 136 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 DHRS11Q6UWP2 260 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM91Q6ZNR0 172 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 OR1L3Q8NH93 324 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PCED1AQ9H1Q7 454 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PARP11Q9NR21 331 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 FLRT3Q9NZU0 649 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 OR1A1Q9P1Q5 309 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 STARD10Q9Y365 291 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 IGHV5-51A0A0C4DH38 117 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 NCBP2LA6PVI3 153 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 C11orf94C9JXX5 98 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 TNFSF15O95150 251 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF345Q14585 488 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 OR1C1Q15619 314 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ALKBH6Q3KRA9 238 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MESTQ5EB52 335 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 TSPO2Q5TGU0 170 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 RNF2Q99496 336 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 NPAS1Q99742 590 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PRR13Q9NZ81 148 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MPC1Q9Y5U8 109 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ASXL3Q9C0F0 2248 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 LANCL1O43813 399 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 SEC11BP0C7V7 166 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 GNG10P50151 68 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 RPS4XP62701 263 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 UBE2L3P68036 154 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 HLA-DRB5Q30154 266 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ATG4DQ86TL0 474 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MRPL24Q96A35 216 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 NEU3Q9UQ49 428 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 FAM74A7A6NL05 159 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 CISD3P0C7P0 127 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MYF5P13349 255 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 LSM6P62312 80 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MRGPRGQ86SM5 289 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 C10orf35Q96D05 121 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 COX14Q96I36 57 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ALX4Q9H161 411 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 SRD5A3Q9H8P0 318 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 SEBOXQ9HB31 216 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MYOZ1Q9NP98 299 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 ZFP64Q9NPA5 681 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 MRPS18AQ9NVS2 196 aaKnown RBP6.88□□□□□ -1.31
NEDD9-204ENST00000448183 PITPNC1Q9UKF7 332 aa6.88□□□□□ -1.31
NEDD9-204ENST00000448183 TNRC6CQ9HCJ0 1690 aaKnown RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 H3BQ15 152 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 M0R2Z0 102 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SP1P08047 785 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 SMAD4Q13485 552 aaKnown RBP6.87□□□□□ -1.31
NEDD9-204ENST00000448183 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 MPV17LQ2QL34 196 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 TUSC1Q2TAM9 212 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ANKRD37Q7Z713 158 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 GPBAR1Q8TDU6 330 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ASB10Q8WXI3 467 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ADTRPQ96IZ2 230 aa6.87□□□□□ -1.31
NEDD9-204ENST00000448183 ANGPTL4Q9BY76 406 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms