RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CD3DP04234 171 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 COX7A1P24310 79 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 AVPI1Q5T686 147 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 YIPF6Q96EC8 236 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF586Q9NXT0 402 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 C3orf85A0A1B0GTC6 90 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 CTDSPLO15194 276 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SMPD2O60906 423 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 OR2C1O95371 312 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 CCL3P10147 92 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 PSG6Q00889 435 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 PAX5Q02548 391 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM27BQ5VT28 67 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 PRSS41Q7RTY9 318 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 DHRS7CA6NNS2 312 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 IAPPP10997 89 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SLC25A4P12235 298 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 LPAR6P43657 344 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 NDUFA6P56556 154 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM122CQ6P4D5 195 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 BAP18Q8IXM2 172 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ZBTB44Q8NCP5 570 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF721Q8TF20 911 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SPACA5Q96QH8 159 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 MTFP1Q9UDX5 166 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 STARD10Q9Y365 291 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 LRFN3Q9BTN0 628 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ISG20L2Q9H9L3 353 aaKnown RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 MANBALQ9NQG1 85 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SLC25A10Q9UBX3 287 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 TPRP12270 2363 aaKnown RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SBK3P0C264 359 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 PLPPR5Q32ZL2 321 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 Q3ZCU0 254 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ETV3LQ6ZN32 361 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 GAPDHP04406 335 aaKnown RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 LAMTOR1Q6IAA8 161 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 OR8B12Q8NGG6 310 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 OR4C16Q8NGL9 310 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 KCNE3Q9Y6H6 103 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A10PA6NDY2 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A18PA6NE21 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A16PA6NEW6 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A20PA6NIJ5 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A8PA6NJQ4 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A7PA6NKC0 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A22PA8MWA6 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A12PA8MX19 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A5PA8MXJ8 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A23PA8MXZ1 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 RAB29O14966 203 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A15PP0C7V4 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A13PP0C7W8 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A14PP0C7W9 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 FAM90A24PP0C7X0 464 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 OR13C7P0DN81 318 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ASCL1P50553 236 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
PTPN3-204ENST00000446349 ZNF705GA8MUZ8 300 aaPredicted RBP7.52□□□□□ -1.2
PTPN3-204ENST00000446349 CD37P11049 281 aa7.52□□□□□ -1.2
PTPN3-204ENST00000446349 DGCR2P98153 550 aa7.52□□□□□ -1.2
PTPN3-204ENST00000446349 IL24Q13007 206 aa7.52□□□□□ -1.2
PTPN3-204ENST00000446349 NCR3LG1Q68D85 454 aa7.52□□□□□ -1.2
PTPN3-204ENST00000446349 TVP23CQ96ET8 276 aa7.52□□□□□ -1.2
PTPN3-204ENST00000446349 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 IGLV3-19P01714 112 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CD1AP06126 327 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CT62P0C5K7 136 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CLEC2LP0C7M8 214 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 HYAL4Q2M3T9 481 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 GSX2Q9BZM3 304 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 B9A039 149 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 HOXB3P14651 431 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CD96P40200 585 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RBPMS2Q6ZRY4 209 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RBPMSQ93062 196 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 TMPRSS5Q9H3S3 457 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 ZNF385DQ9H6B1 395 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 MGAMO43451 1857 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 A0A1W2PPV9 198 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NPIPB13A6NJU9 1138 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NPIPB4C9JG80 1138 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 SLC31A2O15432 143 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CTLA4P16410 223 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RPS4Y1P22090 263 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RPL30P62888 115 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 H3F3CQ6NXT2 135 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RHOUQ7L0Q8 258 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 MOGAT3Q86VF5 341 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 ARHGAP5-AS1Q96IT6 56 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CHST5Q9GZS9 411 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NARFLQ9H6Q4 476 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms