RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PGA5P0DJD9 388 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 BMP5P22003 454 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 IGFBP7Q16270 282 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 ALG14Q96F25 216 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 BOD1Q96IK1 185 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 CEP290O15078 2479 aa16.52■□□□□ 0.23
SHANK3-203ENST00000445220 CXCL13O43927 109 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 RPS4Y1P22090 263 aaKnown RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 FMODQ06828 376 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 Q8IYB0 196 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 APOBEC3DQ96AK3 386 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 TRMT61AQ96FX7 289 aaKnown RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 SRD5A3Q9H8P0 318 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 RALYQ9UKM9 306 aaKnown RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 KLF13Q9Y2Y9 288 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 PQLC2LA1A4F0 135 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 VDAC1P21796 283 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 SMIM21Q3B7S5 101 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 MRPL24Q96A35 216 aaKnown RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 LRRC3BQ96PB8 259 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 MENTQ9BUN1 341 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 RCC2Q9P258 522 aaKnown RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 KIAA1456Q9P272 454 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 NAGKQ9UJ70 344 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 CFDP00746 253 aaPredicted RBP16.51■□□□□ 0.23
SHANK3-203ENST00000445220 TCTN1Q2MV58 587 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 LDLRAD3Q86YD5 345 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 TMEM167BQ9NRX6 74 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 CBR3O75828 277 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 TMEM215Q68D42 235 aa16.51■□□□□ 0.23
SHANK3-203ENST00000445220 TP53RKQ96S44 253 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 CRISPLD2Q9H0B8 497 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 LPAR5Q9H1C0 372 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 SH2D2AQ9NP31 389 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 SLC7A10Q9NS82 523 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 FRRS1LQ9P0K9 344 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 CHST1O43916 411 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 PDCD1Q15116 288 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 TMEM255AQ5JRV8 349 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 OR4A47Q6IF82 309 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 ZNF343Q6P1L6 599 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 RNF24Q9Y225 148 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 LRRC3CA6NJW4 275 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 PDE6DO43924 150 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 CEACAM6P40199 344 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 TFF2Q03403 129 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 OR2T6Q8NHC8 308 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 TMEM230Q96A57 120 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 TRBV23-1A0A0A0MS06 115 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 CDS2O95674 445 aa16.5■□□□□ 0.23
SHANK3-203ENST00000445220 ST8SIA5O15466 376 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 TRGC2P03986 189 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 CISD3P0C7P0 127 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 BCL3P20749 454 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 GFERP55789 205 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 OR4C3Q8NH37 302 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 DTD1Q8TEA8 209 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 MRGPRX3Q96LB0 322 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 AAMDCQ9H7C9 122 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 HYAL3O43820 417 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-203ENST00000445220 IGHV3-15A0A0B4J1V0 119 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 SNURFLB1AK76 121 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 HOXC4P09017 264 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-203ENST00000445220 ZGLP1P0C6A0 271 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 GABRG2P18507 467 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 HOXA6P31267 233 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 TCL1AP56279 114 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 GNG3P63215 75 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 DCAF12L2Q5VW00 463 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 SLC35E3Q7Z769 313 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 RER1O15258 196 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 CYB5R3P00387 301 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-203ENST00000445220 VSIG10L2P0DP72 767 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 CDX1P47902 265 aaPredicted RBP16.49■□□□□ 0.23
SHANK3-203ENST00000445220 C1orf53Q5VUE5 145 aa16.49■□□□□ 0.23
SHANK3-203ENST00000445220 KNL1Q8NG31 2342 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 GAPDHP04406 335 aaKnown RBP16.48■□□□□ 0.23
SHANK3-203ENST00000445220 TBC1D26Q86UD7 250 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 ADAD2Q8NCV1 583 aaKnown RBP16.48■□□□□ 0.23
SHANK3-203ENST00000445220 MRPL30Q8TCC3 161 aaKnown RBP16.48■□□□□ 0.23
SHANK3-203ENST00000445220 ZPBPQ9BS86 351 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 BRWD3Q6RI45 1802 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 A0A1B0GV90 55 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 REC114Q7Z4M0 266 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 TMEM56Q96MV1 263 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 FOXB1Q99853 325 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 PARD6GQ9BYG4 376 aaPredicted RBP16.48■□□□□ 0.23
SHANK3-203ENST00000445220 TAAR3PQ9P1P4 343 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 LOC105371267A0A1B0GV96 52 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 OR4C45A6NMZ5 311 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 SIGLEC5O15389 551 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 ADAM11O75078 769 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 IER3P46695 156 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 CCL11P51671 97 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 ZNF117Q03924 483 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 SIGLEC14Q08ET2 396 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 CEACAM16Q2WEN9 425 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 TSPO2Q5TGU0 170 aa16.48■□□□□ 0.23
SHANK3-203ENST00000445220 OR2A5Q96R48 311 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms