RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CNTNAP1P78357 1384 aa3.22□□□□□ -1.89
CDC42BPA-207ENST00000441725 NKTRP30414 1462 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-207ENST00000441725 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
CDC42BPA-207ENST00000441725 GOLGA3Q08378 1498 aa3.22□□□□□ -1.89
CDC42BPA-207ENST00000441725 MROH1Q8NDA8 1641 aa3.22□□□□□ -1.89
CDC42BPA-207ENST00000441725 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.21□□□□□ -1.89
CDC42BPA-207ENST00000441725 RLFQ13129 1914 aa3.21□□□□□ -1.89
CDC42BPA-207ENST00000441725 AKAP11Q9UKA4 1901 aa3.21□□□□□ -1.89
CDC42BPA-207ENST00000441725 PHF3Q92576 2039 aaKnown RBP3.21□□□□□ -1.89
CDC42BPA-207ENST00000441725 PZPP20742 1482 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 A0A1B0GU03 582 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TRAPPC2LH3BP13 241 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SOCS3O14543 225 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ERI3O43414 337 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SOX15O60248 233 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CNMDO75829 334 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC2A10O95528 541 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CSF3P09919 207 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CYBAP13498 195 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PVALBP20472 110 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 FASP25445 335 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TDGF1P3P51864 188 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 BIDP55957 195 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TPI1P60174 286 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPL31P62899 125 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDK5Q00535 292 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TTLL9Q3SXZ7 439 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 NCMAPQ5T1S8 102 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 BAIAP2L2Q6UXY1 529 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMPPEQ6ZT21 453 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 DOLPP1Q86YN1 238 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 DAW1Q8N136 415 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 C9orf62Q8N4C0 152 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF557Q8N988 423 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ACOT4Q8N9L9 421 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR4M2Q8NGB6 313 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR6T1Q8NGN1 323 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR13G1Q8NGZ3 307 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 C1orf54Q8WWF1 131 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 DNAJC19Q96DA6 116 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SMARCD1Q96GM5 515 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PYURFQ96I23 114 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 FCRL1Q96LA6 429 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 NXF2Q9GZY0 626 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 COPZ2Q9P299 210 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 GNPTGQ9UJJ9 305 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 BAIAP2Q9UQB8 552 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 VIRMAQ69YN4 1812 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ASXL1Q8IXJ9 1541 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 TDRD15B5MCY1 1934 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PSME4Q14997 1843 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM159BA6NKW6 160 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR5B21A6NL26 309 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SAP18O00422 153 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC17A2O00624 439 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SLC16A7O60669 478 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ALOX12BO75342 701 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CFC1BP0CG36 223 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CFC1P0CG37 223 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 LAMP1P11279 417 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDKN2BP42772 138 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPL29P47914 159 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 HNRNPA3P51991 378 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF133P52736 654 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RAB25P57735 213 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPS20P60866 119 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PSG4Q00888 419 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR5I1Q13606 314 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 GUSBP1Q15486 140 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PABPC1L2AQ5JQF8 200 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 NHLRC3Q5JS37 347 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RWDD4Q6NW29 188 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 WDR74Q6RFH5 385 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF567Q8N184 647 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 MUC15Q8N387 334 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 WDR31Q8NA23 367 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR4C13Q8NGP0 309 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR5K2Q8NHB8 316 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RASL10AQ92737 203 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 MAGEB18Q96M61 343 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR51I1Q9H343 314 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 JPT2Q9H910 190 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 SH2D2AQ9NP31 389 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 LHX9Q9NQ69 397 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 ARMCX1Q9P291 453 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 VPS29Q9UBQ0 182 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 CTSZQ9UBR2 303 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPL36Q9Y3U8 105 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 UGT2A1Q9Y4X1 527 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 RFNGQ9Y644 331 aa3.21□□□□□ -1.9
CDC42BPA-207ENST00000441725 PLXNC1O60486 1568 aa3.2□□□□□ -1.9
CDC42BPA-207ENST00000441725 SAMD9LQ8IVG5 1584 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms